RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 TRBV6-5A0A0K0K1A5 114 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 C7orf77A4D0Y5 90 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 USP17L23D6RBM5 183 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 POLR2KP53803 58 aaKnown RBP3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 PNRC1Q12796 327 aaPredicted RBP3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 RNASE13Q5GAN3 156 aaKnown RBP3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 C10orf25Q5T742 122 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 SPATA12Q7Z6I5 190 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 UBE2WQ96B02 151 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 YPEL4Q96NS1 127 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 CHCHD5Q9BSY4 110 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 NIT2Q9NQR4 276 aa3.32□□□□□ -1.88
CTNNA3-204ENST00000494580 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 TGIF2-C20orf24A0A0A6YYL0 155 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 TRAV8-6A0A0B4J262 113 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 IGHV1-24A0A0C4DH33 117 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 ESDP10768 282 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 AMTP48728 403 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 KRTAP10-1P60331 282 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 RIGQ13278 110 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 KIAA1644Q3SXP7 199 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 LINC00336Q6ZUF6 198 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 Q6ZUT4 128 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 SH2D6Q7Z4S9 175 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 CBLN2Q8IUK8 224 aa3.31□□□□□ -1.88
CTNNA3-204ENST00000494580 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 A0A087WWC5 75 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 TRBV27A0A0K0K1C4 114 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 TMEM262E9PQX1 116 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 H7C1H1 209 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 TCAPO15273 167 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 APOC3P02656 99 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 APCSP02743 223 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 MT-ND4LP03901 98 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 ANGP03950 147 aaKnown RBP3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 COTL1Q14019 142 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 LAGE3Q14657 143 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 ZC2HC1BQ5TFG8 222 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 ATP5L2Q7Z4Y8 100 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 LINC00269Q8N2A0 174 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 BORCS7Q96B45 105 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 MRAP2Q96G30 205 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 OPRPNQ99935 248 aaPredicted RBP3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 TMEM243Q9BU79 118 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 SMIM2Q9BVW6 85 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
CTNNA3-204ENST00000494580 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 IGKV3OR2-268A0A0C4DH90 116 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 C16orf90A8MZG2 172 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 PPP1R2P9O14990 202 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 SCO1O75880 301 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 FGF6P10767 208 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 CKS2P33552 79 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 RHEBQ15382 184 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 C10orf126Q8N4M7 172 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 Q8N814 137 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 URB1-AS1Q96HZ7 61 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 ST20Q9HBF5 79 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 RPS10P5Q9NQ39 176 aa3.29□□□□□ -1.88
CTNNA3-204ENST00000494580 TRBV24-1A0A075B6N3 115 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 A0A087WX48 190 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 PANO1I0J062 215 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 I3L3M4 83 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 REG3AQ06141 175 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 ELOBQ15370 118 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 SMIM15Q7Z3B0 74 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 FRZBQ92765 325 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 BTF3L4Q96K17 158 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 PRELID3AQ96N28 172 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 UBE2D4Q9Y2X8 147 aa3.28□□□□□ -1.88
CTNNA3-204ENST00000494580 A0A096LNJ9 63 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 A0A1B0GW15 77 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 CRPP02741 224 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 PMCHP20382 165 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 RNASEKQ6P5S7 137 aaKnown RBP3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 LINC00526Q96FQ7 95 aa3.27□□□□□ -1.89
CTNNA3-204ENST00000494580 FLG2Q5D862 2391 aaPredicted RBP3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 TRAV8-3A0A0A6YYJ7 113 aa3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 A0A1B0GUV1 79 aa3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 PHOX2AO14813 284 aa3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 UBE2L6O14933 153 aa3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 PSCAO43653 123 aa3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 PRSS1P07477 247 aa3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 IFI27P40305 119 aaPredicted RBP3.26□□□□□ -1.89
CTNNA3-204ENST00000494580 XCL1P47992 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms