RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 RNF183Q96D59 192 aa11.64□□□□□ -0.55
ATG4B-225ENST00000494465 GTSF1LQ9H1H1 148 aa11.64□□□□□ -0.55
ATG4B-225ENST00000494465 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
ATG4B-225ENST00000494465 A6NJY4 79 aa11.63□□□□□ -0.55
ATG4B-225ENST00000494465 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
ATG4B-225ENST00000494465 ZNF22P17026 224 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-225ENST00000494465 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
ATG4B-225ENST00000494465 COL6A5A8TX70 2615 aa11.62□□□□□ -0.55
ATG4B-225ENST00000494465 HSD52Q0P140 79 aa11.62□□□□□ -0.55
ATG4B-225ENST00000494465 MIFP14174 115 aa11.62□□□□□ -0.55
ATG4B-225ENST00000494465 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
ATG4B-225ENST00000494465 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
ATG4B-225ENST00000494465 HERVK_113P61574 105 aa11.61□□□□□ -0.55
ATG4B-225ENST00000494465 CSDC2Q9Y534 153 aaKnown RBP11.61□□□□□ -0.55
ATG4B-225ENST00000494465 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
ATG4B-225ENST00000494465 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
ATG4B-225ENST00000494465 A8MZ25 164 aa11.59□□□□□ -0.55
ATG4B-225ENST00000494465 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
ATG4B-225ENST00000494465 UBE2D1P51668 147 aa11.59□□□□□ -0.55
ATG4B-225ENST00000494465 Q6ZVH6 145 aa11.59□□□□□ -0.55
ATG4B-225ENST00000494465 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
ATG4B-225ENST00000494465 TINCRA0A1B0GVN0 87 aa11.58□□□□□ -0.56
ATG4B-225ENST00000494465 ORAOV1Q8WV07 137 aa11.58□□□□□ -0.56
ATG4B-225ENST00000494465 PRO0255Q9UI72 69 aa11.58□□□□□ -0.56
ATG4B-225ENST00000494465 ZNF815PA8K554 130 aa11.57□□□□□ -0.56
ATG4B-225ENST00000494465 GYPEP15421 78 aa11.57□□□□□ -0.56
ATG4B-225ENST00000494465 DGAT2L7PQ6IED9 249 aa11.57□□□□□ -0.56
ATG4B-225ENST00000494465 G3V4G9 280 aa11.57□□□□□ -0.56
ATG4B-225ENST00000494465 SEC11AP67812 179 aa11.57□□□□□ -0.56
ATG4B-225ENST00000494465 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
ATG4B-225ENST00000494465 TAX1BP3O14907 124 aa11.56□□□□□ -0.56
ATG4B-225ENST00000494465 PLEKHB2Q96CS7 222 aa11.56□□□□□ -0.56
ATG4B-225ENST00000494465 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
ATG4B-225ENST00000494465 H7C423 109 aa11.55□□□□□ -0.56
ATG4B-225ENST00000494465 DAD1P61803 113 aa11.55□□□□□ -0.56
ATG4B-225ENST00000494465 J3QQQ9 107 aa11.55□□□□□ -0.56
ATG4B-225ENST00000494465 LEPROTO15243 131 aa11.55□□□□□ -0.56
ATG4B-225ENST00000494465 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
ATG4B-225ENST00000494465 VSIG2Q96IQ7 327 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 IGHV3-64A0A075B6Q5 118 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 K7EP13 123 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 UBE2L6O14933 153 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 FXYD2P54710 66 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 OR5A1Q8NGJ0 315 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 COX11Q9Y6N1 276 aa11.54□□□□□ -0.56
ATG4B-225ENST00000494465 PAX4O43316 350 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 GCSHP23434 173 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 TIRAPP58753 221 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 ATP6V0E2Q8NHE4 81 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 TAL2Q16559 108 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 CEND1Q8N111 149 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 RETNQ9HD89 108 aa11.53□□□□□ -0.56
ATG4B-225ENST00000494465 COX6A2Q02221 97 aa11.52□□□□□ -0.57
ATG4B-225ENST00000494465 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
ATG4B-225ENST00000494465 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
ATG4B-225ENST00000494465 AMMECR1LQ6DCA0 310 aa11.52□□□□□ -0.57
ATG4B-225ENST00000494465 TRAV8-3A0A0A6YYJ7 113 aa11.52□□□□□ -0.57
ATG4B-225ENST00000494465 GAGE6Q13070 117 aa11.52□□□□□ -0.57
ATG4B-225ENST00000494465 A0A0J9YY99 117 aa11.51□□□□□ -0.57
ATG4B-225ENST00000494465 ATP5G1P05496 136 aa11.51□□□□□ -0.57
ATG4B-225ENST00000494465 IGHV3-30-3P0DP02 117 aa11.51□□□□□ -0.57
ATG4B-225ENST00000494465 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
ATG4B-225ENST00000494465 GEMIN7Q9H840 131 aaKnown RBP11.51□□□□□ -0.57
ATG4B-225ENST00000494465 CDKN2A-AS1Q9UH64 79 aa11.51□□□□□ -0.57
ATG4B-225ENST00000494465 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
ATG4B-225ENST00000494465 A6NDN8 102 aa11.5□□□□□ -0.57
ATG4B-225ENST00000494465 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
ATG4B-225ENST00000494465 TMEM101Q96IK0 257 aa11.5□□□□□ -0.57
ATG4B-225ENST00000494465 HIST1H4GQ99525 98 aa11.5□□□□□ -0.57
ATG4B-225ENST00000494465 IGLV4-60A0A075B6I1 120 aa11.49□□□□□ -0.57
ATG4B-225ENST00000494465 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
ATG4B-225ENST00000494465 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
ATG4B-225ENST00000494465 SPINK8P0C7L1 97 aa11.49□□□□□ -0.57
ATG4B-225ENST00000494465 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
ATG4B-225ENST00000494465 A0A096LPF7 62 aa11.48□□□□□ -0.57
ATG4B-225ENST00000494465 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
ATG4B-225ENST00000494465 HERVK_113P63121 156 aa11.48□□□□□ -0.57
ATG4B-225ENST00000494465 F5H768 121 aa11.47□□□□□ -0.57
ATG4B-225ENST00000494465 H3BRM9 83 aa11.47□□□□□ -0.57
ATG4B-225ENST00000494465 C12orf74Q32Q52 190 aa11.47□□□□□ -0.57
ATG4B-225ENST00000494465 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
ATG4B-225ENST00000494465 TENM3Q9P273 2699 aa11.46□□□□□ -0.58
ATG4B-225ENST00000494465 C21orf62-AS1Q17RA5 79 aa11.46□□□□□ -0.58
ATG4B-225ENST00000494465 CBY1Q9Y3M2 126 aa11.46□□□□□ -0.58
ATG4B-225ENST00000494465 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
ATG4B-225ENST00000494465 PTTG1IPP53801 180 aa11.45□□□□□ -0.58
ATG4B-225ENST00000494465 SPANXB1Q9NS25 103 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-225ENST00000494465 NBEAL1Q6ZS30 2694 aa11.45□□□□□ -0.58
ATG4B-225ENST00000494465 HTN3P15516 51 aa11.45□□□□□ -0.58
ATG4B-225ENST00000494465 IGLV5-39A0A0G2JS06 123 aa11.44□□□□□ -0.58
ATG4B-225ENST00000494465 NHP2Q9NX24 153 aaKnown RBP11.44□□□□□ -0.58
ATG4B-225ENST00000494465 K7ERJ3 54 aa11.43□□□□□ -0.58
ATG4B-225ENST00000494465 SMIM13P0DJ93 91 aa11.43□□□□□ -0.58
ATG4B-225ENST00000494465 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
ATG4B-225ENST00000494465 A0A0J9YXY3 114 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms