RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 A0A1B0GUT8 65 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
LRCH3-219ENST00000494069 I3L3M4 83 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 NCR2O95944 276 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 TSHBP01222 138 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 APCSP02743 223 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 ESDP10768 282 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 RAB4AP20338 218 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
LRCH3-219ENST00000494069 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 AMMECR1LQ6DCA0 310 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 TMEM191AQ9H0A3 160 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 TMEM242Q9NWH2 141 aa5.45□□□□□ -1.54
LRCH3-219ENST00000494069 NDUFS6O75380 124 aaKnown RBP5.44□□□□□ -1.54
LRCH3-219ENST00000494069 POLR2KP53803 58 aaKnown RBP5.44□□□□□ -1.54
LRCH3-219ENST00000494069 RPL23P62829 140 aaKnown RBP5.44□□□□□ -1.54
LRCH3-219ENST00000494069 FOXI1Q12951 378 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 TMEM241Q24JQ0 296 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 TEX261Q6UWH6 196 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 NUP35Q8NFH5 326 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-219ENST00000494069 ISOC2Q96AB3 205 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 BORCS7Q96B45 105 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 ST20Q9HBF5 79 aa5.44□□□□□ -1.54
LRCH3-219ENST00000494069 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
LRCH3-219ENST00000494069 H7C423 109 aa5.43□□□□□ -1.54
LRCH3-219ENST00000494069 XCL1P47992 114 aa5.43□□□□□ -1.54
LRCH3-219ENST00000494069 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
LRCH3-219ENST00000494069 CIRBPQ14011 172 aaKnown RBP5.43□□□□□ -1.54
LRCH3-219ENST00000494069 ADIRFQ15847 76 aa5.43□□□□□ -1.54
LRCH3-219ENST00000494069 OR5A1Q8NGJ0 315 aa5.43□□□□□ -1.54
LRCH3-219ENST00000494069 A0A087WYN8 130 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 TRBV27A0A0K0K1C4 114 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 LINC00959A0A1B0GUT2 108 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 CCL25O15444 150 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 COX6A2Q02221 97 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 RIGQ13278 110 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 ODF1Q14990 250 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 NRACQ8N912 160 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 PRSS3P2Q8NHM4 247 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 MRAP2Q96G30 205 aa5.42□□□□□ -1.54
LRCH3-219ENST00000494069 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 SMIM27A0A1W2PRY6 76 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 ZNF25P17030 456 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-219ENST00000494069 MRPL51Q4U2R6 128 aaKnown RBP5.41□□□□□ -1.54
LRCH3-219ENST00000494069 FAM74A3Q4VXF1 159 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 CFAP161Q6P656 301 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 DPH3Q96FX2 82 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 BTF3L4Q96K17 158 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 CDC42SE2Q9NRR3 84 aa5.41□□□□□ -1.54
LRCH3-219ENST00000494069 GVQW2A0A096LPI5 108 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-219ENST00000494069 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-219ENST00000494069 C7orf77A4D0Y5 90 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 VCYO14598 125 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 CAMPP49913 170 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 PEA15Q15121 130 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.54
LRCH3-219ENST00000494069 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.54
LRCH3-219ENST00000494069 ZNF664Q8N3J9 261 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 NAT8Q9UHE5 227 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.54
LRCH3-219ENST00000494069 IGKV2-24A0A0C4DH68 120 aa5.39□□□□□ -1.55
LRCH3-219ENST00000494069 SUMO2P61956 95 aaKnown RBP5.39□□□□□ -1.55
LRCH3-219ENST00000494069 MRPL54Q6P161 138 aaKnown RBP5.39□□□□□ -1.55
LRCH3-219ENST00000494069 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
LRCH3-219ENST00000494069 A0A096LNI7 61 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 OXTP01178 125 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 FCER1GP30273 86 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 SS18Q15532 418 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 MAJINQ3KP22 176 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 UBE2D4Q9Y2X8 147 aa5.38□□□□□ -1.55
LRCH3-219ENST00000494069 TNXBP22105 4242 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 A0A1B0GXF2 115 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 PHOX2AO14813 284 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 CKS2P33552 79 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 CD164L2Q6UWJ8 174 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 Q6ZUT4 128 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 STPG4Q8N801 248 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 FAM104AQ969W3 186 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 KIR2DL4Q99706 377 aa5.37□□□□□ -1.55
LRCH3-219ENST00000494069 TRBV24-1A0A075B6N3 115 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 D6R8Y8 96 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 TNFRSF6BO95407 300 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 PPP1R17O96001 155 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 NPYP01303 97 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
LRCH3-219ENST00000494069 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 C5orf38Q86SI9 138 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
LRCH3-219ENST00000494069 OPRPNQ99935 248 aaPredicted RBP5.36□□□□□ -1.55
LRCH3-219ENST00000494069 CSDC2Q9Y534 153 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms