RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 KRTAP26-1Q6PEX3 210 aa12.8□□□□□ -0.36
NELFE-212ENST00000492539 TMEM243Q9BU79 118 aa12.8□□□□□ -0.36
NELFE-212ENST00000492539 APOC3P02656 99 aa12.79□□□□□ -0.36
NELFE-212ENST00000492539 CKS2P33552 79 aa12.79□□□□□ -0.36
NELFE-212ENST00000492539 AMTP48728 403 aa12.79□□□□□ -0.36
NELFE-212ENST00000492539 POLR2KP53803 58 aaKnown RBP12.79□□□□□ -0.36
NELFE-212ENST00000492539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
NELFE-212ENST00000492539 TRBV27A0A0K0K1C4 114 aa12.78□□□□□ -0.36
NELFE-212ENST00000492539 PPBPP02775 128 aa12.78□□□□□ -0.36
NELFE-212ENST00000492539 S100PP25815 95 aa12.78□□□□□ -0.36
NELFE-212ENST00000492539 GAGE6Q13070 117 aa12.78□□□□□ -0.36
NELFE-212ENST00000492539 SVBPQ8N300 66 aa12.78□□□□□ -0.36
NELFE-212ENST00000492539 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
NELFE-212ENST00000492539 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
NELFE-212ENST00000492539 D6R8Y8 96 aa12.77□□□□□ -0.37
NELFE-212ENST00000492539 APCSP02743 223 aa12.77□□□□□ -0.37
NELFE-212ENST00000492539 PMCHP20382 165 aa12.77□□□□□ -0.37
NELFE-212ENST00000492539 SUMO2P61956 95 aaKnown RBP12.77□□□□□ -0.37
NELFE-212ENST00000492539 RBX1P62877 108 aa12.77□□□□□ -0.37
NELFE-212ENST00000492539 PANO1I0J062 215 aa12.76□□□□□ -0.37
NELFE-212ENST00000492539 SNAPINO95295 136 aa12.76□□□□□ -0.37
NELFE-212ENST00000492539 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
NELFE-212ENST00000492539 VCYO14598 125 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 PHOX2AO14813 284 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 TNFRSF6BO95407 300 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 TSHBP01222 138 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 CLPSL2Q6UWE3 100 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 SDIM1Q6ZPB5 146 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 LINC00269Q8N2A0 174 aa12.75□□□□□ -0.37
NELFE-212ENST00000492539 UBE2L6O14933 153 aa12.74□□□□□ -0.37
NELFE-212ENST00000492539 RPL32P62910 135 aaKnown RBP12.74□□□□□ -0.37
NELFE-212ENST00000492539 A0A1B0GUV1 79 aa12.73□□□□□ -0.37
NELFE-212ENST00000492539 H7C423 109 aa12.73□□□□□ -0.37
NELFE-212ENST00000492539 TMEM136Q6ZRR5 245 aa12.73□□□□□ -0.37
NELFE-212ENST00000492539 NPYP01303 97 aa12.72□□□□□ -0.37
NELFE-212ENST00000492539 CNBPP62633 177 aaKnown RBP12.72□□□□□ -0.37
NELFE-212ENST00000492539 CIRBPQ14011 172 aaKnown RBP12.72□□□□□ -0.37
NELFE-212ENST00000492539 SLC7A5P1Q8MH63 180 aa12.72□□□□□ -0.37
NELFE-212ENST00000492539 PRELID3AQ96N28 172 aa12.72□□□□□ -0.37
NELFE-212ENST00000492539 MT1HL1P0DM35 61 aa12.71□□□□□ -0.37
NELFE-212ENST00000492539 ESDP10768 282 aa12.71□□□□□ -0.37
NELFE-212ENST00000492539 KIR2DL4Q99706 377 aa12.71□□□□□ -0.37
NELFE-212ENST00000492539 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.37
NELFE-212ENST00000492539 REG3AQ06141 175 aa12.7□□□□□ -0.38
NELFE-212ENST00000492539 C20orf203Q8NBC4 194 aa12.7□□□□□ -0.38
NELFE-212ENST00000492539 SMIM2Q9BVW6 85 aa12.7□□□□□ -0.38
NELFE-212ENST00000492539 TNXBP22105 4242 aa12.7□□□□□ -0.38
NELFE-212ENST00000492539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.69□□□□□ -0.38
NELFE-212ENST00000492539 IGKV2-29A2NJV5 120 aaPredicted RBP12.69□□□□□ -0.38
NELFE-212ENST00000492539 FCER1GP30273 86 aa12.69□□□□□ -0.38
NELFE-212ENST00000492539 COX19Q49B96 90 aa12.69□□□□□ -0.38
NELFE-212ENST00000492539 Q6ZRU5 148 aa12.69□□□□□ -0.38
NELFE-212ENST00000492539 IGLV4-60A0A075B6I1 120 aa12.68□□□□□ -0.38
NELFE-212ENST00000492539 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
NELFE-212ENST00000492539 TCAPO15273 167 aa12.68□□□□□ -0.38
NELFE-212ENST00000492539 GNB1LQ9BYB4 327 aa12.68□□□□□ -0.38
NELFE-212ENST00000492539 TRAV8-4A0A0B4J246 113 aa12.67□□□□□ -0.38
NELFE-212ENST00000492539 PRSS47A8MTI9 375 aa12.67□□□□□ -0.38
NELFE-212ENST00000492539 FGF6P10767 208 aa12.67□□□□□ -0.38
NELFE-212ENST00000492539 AMMECR1LQ6DCA0 310 aa12.67□□□□□ -0.38
NELFE-212ENST00000492539 ZNF25P17030 456 aaPredicted RBP12.66□□□□□ -0.38
NELFE-212ENST00000492539 hDV102S1A0JD36 115 aa12.65□□□□□ -0.38
NELFE-212ENST00000492539 MT-ND6P03923 174 aa12.65□□□□□ -0.38
NELFE-212ENST00000492539 SLPIP03973 132 aa12.65□□□□□ -0.38
NELFE-212ENST00000492539 RNASEKQ6P5S7 137 aaKnown RBP12.65□□□□□ -0.38
NELFE-212ENST00000492539 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
NELFE-212ENST00000492539 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
NELFE-212ENST00000492539 TGIF2-C20orf24A0A0A6YYL0 155 aa12.64□□□□□ -0.39
NELFE-212ENST00000492539 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
NELFE-212ENST00000492539 LRP2P98164 4655 aa12.63□□□□□ -0.39
NELFE-212ENST00000492539 SPACA4Q8TDM5 124 aa12.63□□□□□ -0.39
NELFE-212ENST00000492539 TMEM101Q96IK0 257 aa12.63□□□□□ -0.39
NELFE-212ENST00000492539 A0A087WYN8 130 aa12.62□□□□□ -0.39
NELFE-212ENST00000492539 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
NELFE-212ENST00000492539 CHTF8P0CG12 524 aa12.62□□□□□ -0.39
NELFE-212ENST00000492539 SMAGPQ0VAQ4 97 aa12.62□□□□□ -0.39
NELFE-212ENST00000492539 KIAA1644Q3SXP7 199 aa12.62□□□□□ -0.39
NELFE-212ENST00000492539 TMEM18Q96B42 140 aa12.62□□□□□ -0.39
NELFE-212ENST00000492539 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
NELFE-212ENST00000492539 Q8N8P6 123 aa12.61□□□□□ -0.39
NELFE-212ENST00000492539 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
NELFE-212ENST00000492539 MRPL18Q9H0U6 180 aaKnown RBP12.61□□□□□ -0.39
NELFE-212ENST00000492539 LOC389332A0A1B0GUA5 103 aa12.6□□□□□ -0.39
NELFE-212ENST00000492539 RAB5AP20339 215 aa12.6□□□□□ -0.39
NELFE-212ENST00000492539 YPEL4Q96NS1 127 aa12.6□□□□□ -0.39
NELFE-212ENST00000492539 UBE2D4Q9Y2X8 147 aa12.6□□□□□ -0.39
NELFE-212ENST00000492539 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
NELFE-212ENST00000492539 TIMM21Q9BVV7 248 aa12.59□□□□□ -0.39
NELFE-212ENST00000492539 FABP9Q0Z7S8 132 aa12.58□□□□□ -0.4
NELFE-212ENST00000492539 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
NELFE-212ENST00000492539 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
NELFE-212ENST00000492539 SMCO4Q9NRQ5 59 aa12.58□□□□□ -0.4
NELFE-212ENST00000492539 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
NELFE-212ENST00000492539 PLAC8Q9NZF1 115 aa12.58□□□□□ -0.4
NELFE-212ENST00000492539 K7EMI3 77 aa12.57□□□□□ -0.4
NELFE-212ENST00000492539 ZNF664Q8N3J9 261 aa12.57□□□□□ -0.4
NELFE-212ENST00000492539 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
NELFE-212ENST00000492539 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
NELFE-212ENST00000492539 RNF213Q63HN8 5207 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms