RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CD164L2Q6UWJ8 174 aa8.49□□□□□ -1.05
VARS-227ENST00000489979 ISOC2Q96AB3 205 aa8.49□□□□□ -1.05
VARS-227ENST00000489979 IGLV4-69A0A075B6H9 119 aa8.48□□□□□ -1.05
VARS-227ENST00000489979 BLOC1S1P78537 153 aa8.48□□□□□ -1.05
VARS-227ENST00000489979 PHF5AQ7RTV0 110 aaKnown RBP8.48□□□□□ -1.05
VARS-227ENST00000489979 SMIM12Q96EX1 92 aa8.48□□□□□ -1.05
VARS-227ENST00000489979 CNFNQ9BYD5 112 aa8.48□□□□□ -1.05
VARS-227ENST00000489979 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 I3L3M4 83 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 PMCHP20382 165 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 TAGLN2P37802 199 aaKnown RBP8.47□□□□□ -1.05
VARS-227ENST00000489979 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
VARS-227ENST00000489979 NUP35Q8NFH5 326 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 NUDT11Q96G61 164 aa8.47□□□□□ -1.05
VARS-227ENST00000489979 APOMO95445 188 aa8.46□□□□□ -1.06
VARS-227ENST00000489979 ESDP10768 282 aa8.46□□□□□ -1.06
VARS-227ENST00000489979 ALKAL2Q6UX46 152 aa8.46□□□□□ -1.06
VARS-227ENST00000489979 BIN3Q9NQY0 253 aa8.46□□□□□ -1.06
VARS-227ENST00000489979 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.06
VARS-227ENST00000489979 TRBV20OR9-2A0A075B6H5 130 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
VARS-227ENST00000489979 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 MEF2BQ02080 365 aaPredicted RBP8.45□□□□□ -1.06
VARS-227ENST00000489979 RPL18AQ02543 176 aaKnown RBP8.45□□□□□ -1.06
VARS-227ENST00000489979 PRR4Q16378 134 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 TEX261Q6UWH6 196 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 SMIM15Q7Z3B0 74 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
VARS-227ENST00000489979 TSHBP01222 138 aa8.44□□□□□ -1.06
VARS-227ENST00000489979 MALP21145 153 aa8.44□□□□□ -1.06
VARS-227ENST00000489979 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
VARS-227ENST00000489979 RPP21Q9H633 154 aaKnown RBP8.44□□□□□ -1.06
VARS-227ENST00000489979 TMEM242Q9NWH2 141 aa8.44□□□□□ -1.06
VARS-227ENST00000489979 FAT4Q6V0I7 4981 aa8.43□□□□□ -1.06
VARS-227ENST00000489979 H0Y9J4 135 aa8.43□□□□□ -1.06
VARS-227ENST00000489979 COX7A2LO14548 114 aa8.43□□□□□ -1.06
VARS-227ENST00000489979 PDE6DO43924 150 aa8.43□□□□□ -1.06
VARS-227ENST00000489979 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
VARS-227ENST00000489979 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
VARS-227ENST00000489979 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
VARS-227ENST00000489979 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
VARS-227ENST00000489979 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
VARS-227ENST00000489979 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
VARS-227ENST00000489979 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
VARS-227ENST00000489979 A0A087WZ39 114 aa8.41□□□□□ -1.06
VARS-227ENST00000489979 C1orf196B1AJZ1 125 aa8.41□□□□□ -1.06
VARS-227ENST00000489979 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
VARS-227ENST00000489979 C7orf77A4D0Y5 90 aa8.4□□□□□ -1.06
VARS-227ENST00000489979 KRTAP1-4P0C5Y4 121 aa8.4□□□□□ -1.06
VARS-227ENST00000489979 KRTAP11-1Q8IUC1 163 aa8.4□□□□□ -1.06
VARS-227ENST00000489979 K7EN84 100 aa8.39□□□□□ -1.07
VARS-227ENST00000489979 RNASE13Q5GAN3 156 aaKnown RBP8.39□□□□□ -1.07
VARS-227ENST00000489979 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
VARS-227ENST00000489979 TRAV13-1A0A0B4J241 112 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 POLR2KP53803 58 aaKnown RBP8.38□□□□□ -1.07
VARS-227ENST00000489979 SPAG11BQ08648 103 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 OCC1Q8TAD7 63 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 TSKUQ8WUA8 353 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 FAM210AQ96ND0 272 aa8.38□□□□□ -1.07
VARS-227ENST00000489979 UBE2D1P51668 147 aa8.37□□□□□ -1.07
VARS-227ENST00000489979 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
VARS-227ENST00000489979 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
VARS-227ENST00000489979 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
VARS-227ENST00000489979 GATCO43716 136 aaKnown RBP8.35□□□□□ -1.07
VARS-227ENST00000489979 RAB14P61106 215 aa8.35□□□□□ -1.07
VARS-227ENST00000489979 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
VARS-227ENST00000489979 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
VARS-227ENST00000489979 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
VARS-227ENST00000489979 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
VARS-227ENST00000489979 TMEM250H0YL14 139 aa8.34□□□□□ -1.07
VARS-227ENST00000489979 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
VARS-227ENST00000489979 IMMP2LQ96T52 175 aa8.34□□□□□ -1.07
VARS-227ENST00000489979 MUC17Q685J3 4493 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 A8MWL6 223 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 FCER1GP30273 86 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 CEBPGP53567 150 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 Q6ZUT4 128 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 ORAOV1Q8WV07 137 aa8.33□□□□□ -1.08
VARS-227ENST00000489979 VCYO14598 125 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 RAB4AP20338 218 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 PEA15Q15121 130 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 GAGE2EQ4V326 116 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 BORCS7Q96B45 105 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 TMEM191AQ9H0A3 160 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 GAGE2DQ9UEU5 116 aa8.32□□□□□ -1.08
VARS-227ENST00000489979 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
VARS-227ENST00000489979 NDUFA1O15239 70 aa8.31□□□□□ -1.08
VARS-227ENST00000489979 TSPAN13O95857 204 aa8.31□□□□□ -1.08
VARS-227ENST00000489979 TLX1NBP0CAT3 122 aa8.31□□□□□ -1.08
VARS-227ENST00000489979 UBE2BP63146 152 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms