RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 NUPR2A6NF83 97 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 ZNF815PA8K554 130 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 HMGN4O00479 90 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 IGHV3-33P01772 117 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 PLGLAQ15195 96 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 TVP23CQ96ET8 276 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 DMAC1Q96GE9 116 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 Q9BRP9 147 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 TMEM14BQ9NUH8 114 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 V9GYH0 126 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 KIAA0100Q14667 2235 aaKnown RBP1.68□□□□□ -2.14
RBM28-207ENST00000488249 RALGAPBQ86X10 1494 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 CDC42BPGQ6DT37 1551 aa1.68□□□□□ -2.14
RBM28-207ENST00000488249 ZNF142P52746 1687 aaPredicted RBP1.67□□□□□ -2.14
RBM28-207ENST00000488249 ZGRF1Q86YA3 2104 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 KIF21BO75037 1637 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 NESP48681 1621 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 PRR14LQ5THK1 2151 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 IFT172Q9UG01 1749 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 IGLV3-32A0A0A0MS00 114 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 LOC101927531A0A1B0GV80 90 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 CEBPZOSA8MTT3 80 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 IGKV1-17P01599 117 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 CTSGP08311 255 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 SPINT3P49223 89 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 CNBPP62633 177 aaKnown RBP1.67□□□□□ -2.14
RBM28-207ENST00000488249 PYDC2Q56P42 97 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 Q6JHZ5 121 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 SPINT4Q6UDR6 99 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
RBM28-207ENST00000488249 UGGT1Q9NYU2 1555 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 COL4A5P29400 1685 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 SCN7AQ01118 1682 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 PLCH1Q4KWH8 1693 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 GBF1Q92538 1859 aa1.67□□□□□ -2.14
RBM28-207ENST00000488249 BAZ2BQ9UIF8 2168 aaKnown RBP1.66□□□□□ -2.14
RBM28-207ENST00000488249 SLIT2O94813 1529 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 ABCA5Q8WWZ7 1642 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 HEATR1Q9H583 2144 aaKnown RBP1.66□□□□□ -2.14
RBM28-207ENST00000488249 IGKV3-7A0A075B6H7 116 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 FXYD6-FXYD2A0A087WZ82 144 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 IGLV3-19P01714 112 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 ELOF1P60002 83 aaKnown RBP1.66□□□□□ -2.14
RBM28-207ENST00000488249 FXYD6Q9H0Q3 95 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 PSORS1C2Q9UIG4 136 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 LENEPQ9Y5L5 61 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 SAMD9Q5K651 1589 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 CEP170BQ9Y4F5 1589 aaPredicted RBP1.66□□□□□ -2.14
RBM28-207ENST00000488249 ALS2Q96Q42 1657 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 ESPL1Q14674 2120 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 NRXN2Q9P2S2 1712 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 PAPPAQ13219 1627 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 ALKQ9UM73 1620 aa1.66□□□□□ -2.14
RBM28-207ENST00000488249 RP1P56715 2156 aa1.65□□□□□ -2.14
RBM28-207ENST00000488249 CTTNBP2Q8WZ74 1663 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 CD163L1Q9NR16 1453 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 TRBV6-8A0A0A6YYG3 113 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 LOC285095A0A1B0GVY8 99 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 HIGD1CA8MV81 97 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 SAA2P0DJI9 122 aaPredicted RBP1.65□□□□□ -2.15
RBM28-207ENST00000488249 HRES1P13985 223 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 Q6ZTI0 123 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 PATE1Q8WXA2 126 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 ORMDL1Q9P0S3 153 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 UBE2D4Q9Y2X8 147 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 ARL2-SNX15V9GYD0 113 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 SIP14410 1827 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 CACNA1DQ01668 2161 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 ANKRD50Q9ULJ7 1429 aa1.65□□□□□ -2.15
RBM28-207ENST00000488249 CR1P17927 2039 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 MAST1Q9Y2H9 1570 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 MRC1P22897 1456 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 A0A0J9YY99 117 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 H3BVH4 76 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 PPP1R17O96001 155 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 IGHV3-30P01768 117 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 IGHV3-30-5P0DP03 117 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 IFI27P40305 119 aaPredicted RBP1.64□□□□□ -2.15
RBM28-207ENST00000488249 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 BAGE3Q86Y29 109 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 BAGE2Q86Y30 109 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 CCL26Q9Y258 94 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 KIAA0556O60303 1618 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 WIZO95785 1651 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 VWDEQ8N2E2 1590 aa1.64□□□□□ -2.15
RBM28-207ENST00000488249 LRRC37A3O60309 1634 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 PI4KAP42356 2102 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 LOC285556D6RIA3 1793 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 TRAV40A0A0B4J280 105 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 SNRPGP15A8MWD9 76 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 LEPROTL1O95214 131 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 SSBP1Q04837 148 aaKnown RBP1.63□□□□□ -2.15
RBM28-207ENST00000488249 SPAG11BQ08648 103 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 TPRXLQ17RH7 258 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 ATP5EP2Q5VTU8 51 aa1.63□□□□□ -2.15
RBM28-207ENST00000488249 SPAG11AQ6PDA7 123 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms