RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TSHBP01222 138 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 SMAGPQ0VAQ4 97 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 COTL1Q14019 142 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 PMVKQ15126 192 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 C20orf203Q8NBC4 194 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 NEXN-AS1Q8NBZ9 246 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 BAALCQ8WXS3 180 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
BRCA1-216ENST00000484087 PLA2G2DQ9UNK4 145 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 TRBV7-3A0A075B6L6 115 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 IGIPA6NJ69 53 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 P0DMU3 169 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 FAM231AP0DMU4 169 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 FAM231CP0DMU5 169 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 COX8AP10176 69 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 NMUP48645 174 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 EMP1P54849 157 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 CTAG1AP78358 180 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 ZC2HC1BQ5TFG8 222 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 DAZ4Q86SG3 579 aaKnown RBP4.9□□□□□ -1.62
BRCA1-216ENST00000484087 ZNRF2Q8NHG8 242 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 ZNF479Q96JC4 524 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 PRADC1Q9BSG0 188 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 C1orf43Q9BWL3 253 aa4.9□□□□□ -1.62
BRCA1-216ENST00000484087 DAZ3Q9NR90 486 aaKnown RBP4.9□□□□□ -1.62
BRCA1-216ENST00000484087 MRPS16Q9Y3D3 137 aaKnown RBP4.9□□□□□ -1.62
BRCA1-216ENST00000484087 TRBV6-4A0A1B0GX49 114 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 PLAC8L1A1L4L8 177 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 PRSS29PA6NIE9 313 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 NPSP0C0P6 89 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 GYPEP15421 78 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 HERVK_113P61574 105 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 RPL39P62891 51 aaKnown RBP4.89□□□□□ -1.63
BRCA1-216ENST00000484087 Q6ZTC4 211 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 STPG4Q8N801 248 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 C11orf45Q8TAV5 145 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 DEFB104AQ8WTQ1 72 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-216ENST00000484087 VCX2Q9H322 139 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 PYGO1Q9Y3Y4 419 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 NACAE9PAV3 2078 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 VPS13DQ5THJ4 4388 aa4.89□□□□□ -1.63
BRCA1-216ENST00000484087 LYRM9A8MSI8 78 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 DLEU1O43261 78 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 CRYBA4P53673 196 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 DGAT2L7PQ6IED9 249 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 Q6ZSN1 163 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 C11orf68Q9H3H3 251 aaKnown RBP4.88□□□□□ -1.63
BRCA1-216ENST00000484087 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 HHLA3Q9XRX5 114 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 IGHV3-38A0A0C4DH36 116 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 SIVA1O15304 175 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 LY6G6CO95867 125 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 DEFB130BP0DP73 79 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 DEFB130AP0DP74 79 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 MIFP14174 115 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 BATFQ16520 125 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 CEMP1Q6PRD7 247 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-216ENST00000484087 SLC25A29Q8N8R3 303 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 C2orf88Q9BSF0 95 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 SNHG12Q9BXW3 62 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 CST9LQ9H4G1 147 aa4.88□□□□□ -1.63
BRCA1-216ENST00000484087 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 UBE2L6O14933 153 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 UBE2D3P61077 147 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 UBE2D2P62837 147 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 GAGE1Q13065 139 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 GAGE4Q13068 117 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 GAGE5Q13069 117 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 C12orf74Q32Q52 190 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 BOD1L2Q8IYS8 172 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 LINC00476Q8WZB0 136 aa4.87□□□□□ -1.63
BRCA1-216ENST00000484087 IGLV4-3A0A075B6K6 122 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 TEX48A0A1B0GUV7 120 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 NUPR2A6NF83 97 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 TCTAP57738 103 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 COL5A1-AS1Q5SY13 56 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 TMEM170BQ5T4T1 132 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 LINC00612Q8N6U2 182 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 GTSF1LQ9H1H1 148 aa4.86□□□□□ -1.63
BRCA1-216ENST00000484087 TRBV25-1A0A075B6N4 114 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-216ENST00000484087 TRAV8-6A0A0B4J262 113 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-216ENST00000484087 C11orf86A6NJI1 115 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 IGLL5B9A064 214 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 E9PLD3 99 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 SPART-AS1P0CW21 52 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 HTN3P15516 51 aa4.85□□□□□ -1.63
BRCA1-216ENST00000484087 HINT1P49773 126 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-216ENST00000484087 DAD1P61803 113 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms