RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 CEND1Q8N111 149 aa4.2□□□□□ -1.74
CBX3-206ENST00000481057 LRRC29Q8WV35 223 aa4.2□□□□□ -1.74
CBX3-206ENST00000481057 MGST2Q99735 147 aa4.2□□□□□ -1.74
CBX3-206ENST00000481057 PDCD1LG2Q9BQ51 273 aa4.2□□□□□ -1.74
CBX3-206ENST00000481057 C11orf1Q9H5F2 150 aa4.2□□□□□ -1.74
CBX3-206ENST00000481057 ZNF331Q9NQX6 463 aaPredicted RBP4.2□□□□□ -1.74
CBX3-206ENST00000481057 IGLV8-61A0A075B6I0 122 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 TRAV2A0A0B4J234 112 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 TRAV8-2A0A0B4J237 113 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 TRAV10A0A0B4J240 114 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 TRAV8-4A0A0B4J246 113 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 OOSP1A8MZH6 123 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 H3BTX0 84 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 H7C1H1 209 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 ACYP1P07311 99 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 IGFBP3P17936 291 aaPredicted RBP4.19□□□□□ -1.74
CBX3-206ENST00000481057 RTL8BQ17RB0 113 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 C1orf100Q5SVJ3 147 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 Q6ZSR3 168 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 MRPL55Q7Z7F7 128 aaKnown RBP4.19□□□□□ -1.74
CBX3-206ENST00000481057 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 ZC2HC1AQ96GY0 325 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 SLC25A2Q9BXI2 301 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 TMEM59Q9BXS4 323 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 OSTCQ9NRP0 149 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 TMEM14AQ9Y6G1 99 aa4.19□□□□□ -1.74
CBX3-206ENST00000481057 NACAE9PAV3 2078 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 TRAV12-2A0A075B6T6 113 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 TRAV27A0A087WT01 109 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 NBDYA0A0U1RRE5 68 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 IL4P05112 153 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 IFI6P09912 130 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 PYYP10082 97 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 CXCL5P42830 114 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 FOXA3P55318 350 aaPredicted RBP4.18□□□□□ -1.74
CBX3-206ENST00000481057 C1orf140Q5VVS0 124 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 IL1F10Q8WWZ1 152 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 WFDC6Q9BQY6 131 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 AGPAT4-IT1Q9H0P7 198 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 C11orf68Q9H3H3 251 aaKnown RBP4.18□□□□□ -1.74
CBX3-206ENST00000481057 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
CBX3-206ENST00000481057 RBAKDNA6NC62 111 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 CST7O76096 145 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 NDUFB2O95178 105 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 LYPD3O95274 346 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 PPYP01298 95 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 ZNF823P16415 610 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 ZNF32P17041 273 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 MINOS1Q5TGZ0 78 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 ZNF826PQ6ZT77 177 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 SLC25A48Q6ZT89 311 aaKnown RBP4.17□□□□□ -1.74
CBX3-206ENST00000481057 EXOC3-AS1Q8N2X6 119 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 C5orf56Q8N8D9 126 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 NMNAT3Q96T66 252 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 HDHD3Q9BSH5 251 aaPredicted RBP4.17□□□□□ -1.74
CBX3-206ENST00000481057 SHANK2-AS3Q9BTD1 123 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 CHAC1Q9BUX1 264 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 NHP2Q9NX24 153 aaKnown RBP4.17□□□□□ -1.74
CBX3-206ENST00000481057 SERP1Q9Y6X1 66 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 MINOS1-NBL1R4GNA1 71 aa4.17□□□□□ -1.74
CBX3-206ENST00000481057 SMIM26A0A096LP01 95 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 TRAV8-1A0A0A6YYK1 113 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 TRAV26-2A0A0B4J265 109 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 DEFB4AO15263 64 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 PGLYRP1O75594 196 aaPredicted RBP4.16□□□□□ -1.74
CBX3-206ENST00000481057 IGKCP01834 107 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 GYPBP06028 91 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 ASAH2BP0C7U1 165 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 GCHFRP30047 84 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 NPC2P61916 151 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 UBE2L3P68036 154 aaKnown RBP4.16□□□□□ -1.74
CBX3-206ENST00000481057 MRPS36P82909 103 aaKnown RBP4.16□□□□□ -1.74
CBX3-206ENST00000481057 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 PDPNQ86YL7 162 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 VKORC1L1Q8N0U8 176 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 CARD19Q96LW7 228 aa4.16□□□□□ -1.74
CBX3-206ENST00000481057 SMIM27A0A1W2PRY6 76 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 MGST1P10620 155 aaKnown RBP4.15□□□□□ -1.75
CBX3-206ENST00000481057 CCL3L1P16619 93 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 FXYD2P54710 66 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 APOC4P55056 127 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.75
CBX3-206ENST00000481057 HMGN2P46Q86SG4 172 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 BORCS8Q96FH0 119 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 PRSS27Q9BQR3 290 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 RTL8AQ9BWD3 113 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 EPDR1Q9UM22 224 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 V9GYV3 84 aa4.15□□□□□ -1.75
CBX3-206ENST00000481057 CPSF4LA6NMK7 179 aaKnown RBP4.14□□□□□ -1.75
CBX3-206ENST00000481057 IQCF6A8MYZ5 107 aa4.14□□□□□ -1.75
CBX3-206ENST00000481057 NPYP01303 97 aa4.14□□□□□ -1.75
CBX3-206ENST00000481057 IGLV1-47P01700 117 aa4.14□□□□□ -1.75
CBX3-206ENST00000481057 TFF1P04155 84 aa4.14□□□□□ -1.75
CBX3-206ENST00000481057 HMGN2P05204 90 aaKnown RBP4.14□□□□□ -1.75
CBX3-206ENST00000481057 CTLA4P16410 223 aa4.14□□□□□ -1.75
CBX3-206ENST00000481057 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms