RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	FSIP2	Q5CZC0	6907 aa		6.34	□□□□□ -1.39
APTX-222	ENST00000478279	RPL35	P42766	123 aa	Known RBP	6.33	□□□□□ -1.4
APTX-222	ENST00000478279	RPL18A	Q02543	176 aa	Known RBP	6.33	□□□□□ -1.4
APTX-222	ENST00000478279	EIF5AL1	Q6IS14	154 aa	Known RBP	6.33	□□□□□ -1.4
APTX-222	ENST00000478279	LYZL1	Q6UWQ5	148 aa		6.33	□□□□□ -1.4
APTX-222	ENST00000478279	TSKU	Q8WUA8	353 aa		6.33	□□□□□ -1.4
APTX-222	ENST00000478279	CAMK2N2	Q96S95	79 aa		6.33	□□□□□ -1.4
APTX-222	ENST00000478279	XKRY2	A2RUG3	117 aa		6.32	□□□□□ -1.4
APTX-222	ENST00000478279	C19orf71	A6NCJ1	209 aa		6.32	□□□□□ -1.4
APTX-222	ENST00000478279	HMSD	A8MTL9	139 aa		6.32	□□□□□ -1.4
APTX-222	ENST00000478279	GIP	P09681	153 aa	Predicted RBP	6.32	□□□□□ -1.4
APTX-222	ENST00000478279	KRTAP11-1	Q8IUC1	163 aa		6.32	□□□□□ -1.4
APTX-222	ENST00000478279	RPL39L	Q96EH5	51 aa	Known RBP	6.32	□□□□□ -1.4
APTX-222	ENST00000478279	C2orf48	Q96LS8	159 aa		6.32	□□□□□ -1.4
APTX-222	ENST00000478279	SDHAF1	A6NFY7	115 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	BCL2L11	O43521	198 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	IFNA1	P01562	189 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	MAL	P21145	153 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	SFT2D1	Q8WV19	159 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	MBD3L1	Q8WWY6	194 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	CDC42SE2	Q9NRR3	84 aa		6.31	□□□□□ -1.4
APTX-222	ENST00000478279	CARHSP1	Q9Y2V2	147 aa	Known RBP	6.31	□□□□□ -1.4
APTX-222	ENST00000478279	FXYD6-FXYD2	A0A087WZ82	144 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279		A0A1B0GV50	99 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	COX7A2L	O14548	114 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	TSPAN13	O95857	204 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	ESD	P10768	282 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	TWIST1	Q15672	202 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	RNF151	Q2KHN1	245 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	COMMD7	Q86VX2	200 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	OPRPN	Q99935	248 aa	Predicted RBP	6.3	□□□□□ -1.4
APTX-222	ENST00000478279	CYTL1	Q9NRR1	136 aa		6.3	□□□□□ -1.4
APTX-222	ENST00000478279	TMA7	Q9Y2S6	64 aa	Known RBP	6.3	□□□□□ -1.4
APTX-222	ENST00000478279		I3L3M4	83 aa		6.29	□□□□□ -1.4
APTX-222	ENST00000478279	PMCH	P20382	165 aa		6.29	□□□□□ -1.4
APTX-222	ENST00000478279	CTRL	P40313	264 aa		6.29	□□□□□ -1.4
APTX-222	ENST00000478279	CENPW	Q5EE01	88 aa		6.29	□□□□□ -1.4
APTX-222	ENST00000478279	KCNRG	Q8N5I3	272 aa		6.29	□□□□□ -1.4
APTX-222	ENST00000478279	CNFN	Q9BYD5	112 aa		6.29	□□□□□ -1.4
APTX-222	ENST00000478279	C1orf196	B1AJZ1	125 aa		6.28	□□□□□ -1.4
APTX-222	ENST00000478279	MRPL52	Q86TS9	123 aa	Known RBP	6.28	□□□□□ -1.4
APTX-222	ENST00000478279	FAM213B	Q8TBF2	198 aa		6.28	□□□□□ -1.4
APTX-222	ENST00000478279	C11orf52	Q96A22	123 aa		6.28	□□□□□ -1.4
APTX-222	ENST00000478279	MRAP2	Q96G30	205 aa		6.28	□□□□□ -1.4
APTX-222	ENST00000478279	TRBV6-5	A0A0K0K1A5	114 aa		6.27	□□□□□ -1.41
APTX-222	ENST00000478279	FAM168B	A1KXE4	195 aa		6.27	□□□□□ -1.41
APTX-222	ENST00000478279		G3V3Q6	166 aa		6.27	□□□□□ -1.41
APTX-222	ENST00000478279	SMIM12	Q96EX1	92 aa		6.27	□□□□□ -1.41
APTX-222	ENST00000478279	IMMP2L	Q96T52	175 aa		6.27	□□□□□ -1.41
APTX-222	ENST00000478279	TEX46	H3BTG2	121 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	TSHB	P01222	138 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	GNG4	P50150	75 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	SPAG11B	Q08648	103 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	LCE2D	Q5TA82	110 aa	Predicted RBP	6.26	□□□□□ -1.41
APTX-222	ENST00000478279	SMIM15	Q7Z3B0	74 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	C5orf38	Q86SI9	138 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	TMEM242	Q9NWH2	141 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	MRPL35	Q9NZE8	188 aa	Known RBP	6.26	□□□□□ -1.41
APTX-222	ENST00000478279	CRCT1	Q9UGL9	99 aa		6.26	□□□□□ -1.41
APTX-222	ENST00000478279	RAB19	A4D1S5	217 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	UMAD1	C9J7I0	102 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	SMLR1	H3BR10	107 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	H2AFB1	P0C5Y9	115 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	FOXA3	P55318	350 aa	Predicted RBP	6.25	□□□□□ -1.41
APTX-222	ENST00000478279	UBE2B	P63146	152 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	CCL20	P78556	96 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	UQCC3	Q6UW78	93 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.25	□□□□□ -1.41
APTX-222	ENST00000478279	NUDT10	Q8NFP7	164 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	NUDT11	Q96G61	164 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	BIN3	Q9NQY0	253 aa		6.25	□□□□□ -1.41
APTX-222	ENST00000478279	C7orf77	A4D0Y5	90 aa		6.24	□□□□□ -1.41
APTX-222	ENST00000478279	TLX1NB	P0CAT3	122 aa		6.24	□□□□□ -1.41
APTX-222	ENST00000478279	RPP21	Q9H633	154 aa	Known RBP	6.24	□□□□□ -1.41
APTX-222	ENST00000478279		F8WDY8	70 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	ARPC5	O15511	151 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	ZNF861P	O60384	105 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	ZNF345	Q14585	488 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	KRTAP7-1	Q8IUC3	87 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	OR10D4P	Q8NGN7	298 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	RNASE7	Q9H1E1	156 aa	Known RBP	6.23	□□□□□ -1.41
APTX-222	ENST00000478279	ST20	Q9HBF5	79 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	MANBAL	Q9NQG1	85 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	GNG13	Q9P2W3	67 aa		6.23	□□□□□ -1.41
APTX-222	ENST00000478279	TRBV20OR9-2	A0A075B6H5	130 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	TRAV13-1	A0A0B4J241	112 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279		M0QXV9	152 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	POLR2K	P53803	58 aa	Known RBP	6.22	□□□□□ -1.41
APTX-222	ENST00000478279	S100A12	P80511	92 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	TMEM241	Q24JQ0	296 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	GAGE2E	Q4V326	116 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	CDIP1	Q9H305	208 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	GAGE2D	Q9UEU5	116 aa		6.22	□□□□□ -1.41
APTX-222	ENST00000478279	CSDC2	Q9Y534	153 aa	Known RBP	6.22	□□□□□ -1.41
APTX-222	ENST00000478279	TRBV27	A0A0K0K1C4	114 aa		6.21	□□□□□ -1.42
APTX-222	ENST00000478279	NDUFA1	O15239	70 aa		6.21	□□□□□ -1.42
APTX-222	ENST00000478279	SMAGP	Q0VAQ4	97 aa		6.21	□□□□□ -1.42
APTX-222	ENST00000478279	RNASE13	Q5GAN3	156 aa	Known RBP	6.21	□□□□□ -1.42
APTX-222	ENST00000478279	C10orf25	Q5T742	122 aa		6.21	□□□□□ -1.42
APTX-222	ENST00000478279	ORAOV1	Q8WV07	137 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms