RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CENPXA8MT69 81 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 LTAP01374 205 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 COTL1Q14019 142 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 AMMECR1LQ6DCA0 310 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 CAMK2N2Q96S95 79 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 SMIM3Q9BZL3 60 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 NIT2Q9NQR4 276 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 TMEM167BQ9NRX6 74 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 HSPB11Q9Y547 144 aa4.19□□□□□ -1.74
SPTLC1-205ENST00000477888 CXorf1O96002 111 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 TSHBP01222 138 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 ESDP10768 282 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 LRRC37A5PQ49AS3 106 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 TRIQKQ629K1 86 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 RASL11AQ6T310 242 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 HIST1H2BAQ96A08 127 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 URB1-AS1Q96HZ7 61 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 C2orf48Q96LS8 159 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 AP1S3Q96PC3 154 aa4.18□□□□□ -1.74
SPTLC1-205ENST00000477888 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 IGKV2-29A2NJV5 120 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 C19orf71A6NCJ1 209 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 H7C423 109 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 PLA2G10O15496 165 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 BCL2L11O43521 198 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 MGPP08493 103 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 NTF3P20783 257 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 CTAG1AP78358 180 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 FAM19A5Q7Z5A7 132 aaPredicted RBP4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 FMC1Q96HJ9 113 aa4.17□□□□□ -1.74
SPTLC1-205ENST00000477888 SIX6O95475 246 aa4.16□□□□□ -1.74
SPTLC1-205ENST00000477888 S100A5P33763 92 aa4.16□□□□□ -1.74
SPTLC1-205ENST00000477888 UBE2BP63146 152 aa4.16□□□□□ -1.74
SPTLC1-205ENST00000477888 SS18Q15532 418 aa4.16□□□□□ -1.74
SPTLC1-205ENST00000477888 LINC00337Q8N6G1 96 aa4.16□□□□□ -1.74
SPTLC1-205ENST00000477888 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
SPTLC1-205ENST00000477888 USH2AO75445 5202 aa4.15□□□□□ -1.74
SPTLC1-205ENST00000477888 FAM74A7A6NL05 159 aa4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 M0QXV9 152 aa4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 TLX1NBP0CAT3 122 aa4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 ZNF25P17030 456 aaPredicted RBP4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 UBE2G2P60604 165 aa4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 LINC00242Q5T6M2 205 aa4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 NKX6-2Q9C056 277 aaPredicted RBP4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 NUDT15Q9NV35 164 aa4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
SPTLC1-205ENST00000477888 IGLV5-39A0A0G2JS06 123 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 COX7A2LO14548 114 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 NCR2O95944 276 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 ATP6V0CP27449 155 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 UBE2G1P62253 170 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 PPP1R1CQ8WVI7 109 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 IMMP2LQ96T52 175 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 CDC42SE2Q9NRR3 84 aa4.14□□□□□ -1.75
SPTLC1-205ENST00000477888 PCP4L1A6NKN8 68 aa4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 G3V3Q6 166 aa4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 LYRM1O43325 122 aa4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 MBP02144 154 aa4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 IL7P13232 177 aa4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 FP248Q71RG6 208 aaPredicted RBP4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 BTF3L4Q96K17 158 aa4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 PSMG3Q9BT73 122 aaPredicted RBP4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 ACTR3CQ9C0K3 210 aaPredicted RBP4.13□□□□□ -1.75
SPTLC1-205ENST00000477888 C1orf196B1AJZ1 125 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 NUPR1O60356 82 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 MPC2O95563 127 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 APCSP02743 223 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 H2BFSP57053 126 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 SERF2P84101 59 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 ZNF726P1Q15940 193 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 TMEM241Q24JQ0 296 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 OR2D3Q8NGH3 330 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 TMEM101Q96IK0 257 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 SMDT1Q9H4I9 107 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 TNFSF18Q9UNG2 199 aa4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
SPTLC1-205ENST00000477888 SPAG11BQ08648 103 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 FAM229BQ4G0N7 80 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 C5orf38Q86SI9 138 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 MRPL52Q86TS9 123 aaKnown RBP4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 TCEAL7Q9BRU2 100 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 C6orf48Q9UBA6 75 aa4.11□□□□□ -1.75
SPTLC1-205ENST00000477888 FAM240BA0A1B0GVZ2 78 aa4.1□□□□□ -1.75
SPTLC1-205ENST00000477888 INMT-MINDY4F8WBC2 141 aa4.1□□□□□ -1.75
SPTLC1-205ENST00000477888 RPL28P46779 137 aaKnown RBP4.1□□□□□ -1.75
SPTLC1-205ENST00000477888 FHITP49789 147 aa4.1□□□□□ -1.75
SPTLC1-205ENST00000477888 C9orf129Q5T035 196 aaKnown RBP4.1□□□□□ -1.75
SPTLC1-205ENST00000477888 UNQ6190/PRO20217Q6UXQ8 127 aa4.1□□□□□ -1.75
SPTLC1-205ENST00000477888 OR10D4PQ8NGN7 298 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms