RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 F2Z2F3 143 aa7.26□□□□□ -1.25
HDAC6-219ENST00000476625 TSHBP01222 138 aa7.26□□□□□ -1.25
HDAC6-219ENST00000476625 MT-ND6P03923 174 aa7.26□□□□□ -1.25
HDAC6-219ENST00000476625 CAMPP49913 170 aa7.26□□□□□ -1.25
HDAC6-219ENST00000476625 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-219ENST00000476625 OPRPNQ99935 248 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-219ENST00000476625 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
HDAC6-219ENST00000476625 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
HDAC6-219ENST00000476625 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
HDAC6-219ENST00000476625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-219ENST00000476625 ZNF561-AS1K7EIQ3 104 aa7.25□□□□□ -1.25
HDAC6-219ENST00000476625 K7EN84 100 aa7.25□□□□□ -1.25
HDAC6-219ENST00000476625 MEF2BQ02080 365 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-219ENST00000476625 RPL18AQ02543 176 aaKnown RBP7.25□□□□□ -1.25
HDAC6-219ENST00000476625 NUP35Q8NFH5 326 aa7.25□□□□□ -1.25
HDAC6-219ENST00000476625 MANBALQ9NQG1 85 aa7.25□□□□□ -1.25
HDAC6-219ENST00000476625 NCR2O95944 276 aa7.24□□□□□ -1.25
HDAC6-219ENST00000476625 ESDP10768 282 aa7.24□□□□□ -1.25
HDAC6-219ENST00000476625 PMCHP20382 165 aa7.23□□□□□ -1.25
HDAC6-219ENST00000476625 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
HDAC6-219ENST00000476625 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
HDAC6-219ENST00000476625 CDC42SE2Q9NRR3 84 aa7.23□□□□□ -1.25
HDAC6-219ENST00000476625 MED9Q9NWA0 146 aa7.23□□□□□ -1.25
HDAC6-219ENST00000476625 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 H7C423 109 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 I3L3M4 83 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 SS18Q15532 418 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 PRR4Q16378 134 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 TEX261Q6UWH6 196 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 ALKAL2Q6UX46 152 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 TMEM101Q96IK0 257 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 BTF3L4Q96K17 158 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 CAMK2N2Q96S95 79 aa7.22□□□□□ -1.25
HDAC6-219ENST00000476625 PDE6DO43924 150 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 APOMO95445 188 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 ZNF25P17030 456 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-219ENST00000476625 RAB14P61106 215 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 ZNF664Q8N3J9 261 aa7.21□□□□□ -1.26
HDAC6-219ENST00000476625 SMKR1H3BMG3 65 aa7.2□□□□□ -1.26
HDAC6-219ENST00000476625 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
HDAC6-219ENST00000476625 OCC1Q8TAD7 63 aa7.2□□□□□ -1.26
HDAC6-219ENST00000476625 MRAP2Q96G30 205 aa7.2□□□□□ -1.26
HDAC6-219ENST00000476625 H0Y9J4 135 aa7.19□□□□□ -1.26
HDAC6-219ENST00000476625 MALP21145 153 aa7.19□□□□□ -1.26
HDAC6-219ENST00000476625 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
HDAC6-219ENST00000476625 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 COX7A2LO14548 114 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 Q6ZUT4 128 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 MRPL52Q86TS9 123 aaKnown RBP7.18□□□□□ -1.26
HDAC6-219ENST00000476625 SMIM12Q96EX1 92 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 SMDT1Q9H4I9 107 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 ST20Q9HBF5 79 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 PKIGQ9Y2B9 76 aa7.18□□□□□ -1.26
HDAC6-219ENST00000476625 A0A087WZ39 114 aa7.17□□□□□ -1.26
HDAC6-219ENST00000476625 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
HDAC6-219ENST00000476625 DIRC1Q969H9 104 aa7.17□□□□□ -1.26
HDAC6-219ENST00000476625 ISOC2Q96AB3 205 aa7.17□□□□□ -1.26
HDAC6-219ENST00000476625 BIN3Q9NQY0 253 aa7.17□□□□□ -1.26
HDAC6-219ENST00000476625 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
HDAC6-219ENST00000476625 C7orf77A4D0Y5 90 aa7.16□□□□□ -1.26
HDAC6-219ENST00000476625 TMEM250H0YL14 139 aa7.16□□□□□ -1.26
HDAC6-219ENST00000476625 POLR2KP53803 58 aaKnown RBP7.16□□□□□ -1.26
HDAC6-219ENST00000476625 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-219ENST00000476625 AMN1Q8IY45 258 aa7.16□□□□□ -1.26
HDAC6-219ENST00000476625 UBE2D4Q9Y2X8 147 aa7.16□□□□□ -1.26
HDAC6-219ENST00000476625 GATCO43716 136 aaKnown RBP7.15□□□□□ -1.26
HDAC6-219ENST00000476625 TSPAN13O95857 204 aa7.15□□□□□ -1.26
HDAC6-219ENST00000476625 SMIM15Q7Z3B0 74 aa7.15□□□□□ -1.26
HDAC6-219ENST00000476625 EIF5A2Q9GZV4 153 aaKnown RBP7.15□□□□□ -1.26
HDAC6-219ENST00000476625 RAB4AP20338 218 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 PEA15Q15121 130 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 UNQ6190/PRO20217Q6UXQ8 127 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 FAM104AQ969W3 186 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 C2orf48Q96LS8 159 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 FAM210AQ96ND0 272 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
HDAC6-219ENST00000476625 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
HDAC6-219ENST00000476625 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
HDAC6-219ENST00000476625 C1orf196B1AJZ1 125 aa7.13□□□□□ -1.27
HDAC6-219ENST00000476625 ORAOV1Q8WV07 137 aa7.13□□□□□ -1.27
HDAC6-219ENST00000476625 C6orf48Q9UBA6 75 aa7.13□□□□□ -1.27
HDAC6-219ENST00000476625 UBE2D1P51668 147 aa7.12□□□□□ -1.27
HDAC6-219ENST00000476625 RPL39P62891 51 aaKnown RBP7.12□□□□□ -1.27
HDAC6-219ENST00000476625 FAM74A3Q4VXF1 159 aa7.12□□□□□ -1.27
HDAC6-219ENST00000476625 NRACQ8N912 160 aa7.12□□□□□ -1.27
HDAC6-219ENST00000476625 IGLV1-50A0A075B6I6 118 aa7.11□□□□□ -1.27
HDAC6-219ENST00000476625 FCER1GP30273 86 aa7.11□□□□□ -1.27
HDAC6-219ENST00000476625 CEBPGP53567 150 aa7.11□□□□□ -1.27
HDAC6-219ENST00000476625 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
HDAC6-219ENST00000476625 M0QXV9 152 aa7.1□□□□□ -1.27
HDAC6-219ENST00000476625 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
HDAC6-219ENST00000476625 TMEM191AQ9H0A3 160 aa7.1□□□□□ -1.27
HDAC6-219ENST00000476625 MRPL35Q9NZE8 188 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms