RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 GAS8-AS1O95177 125 aa10□□□□□ -0.81
VARS-223ENST00000474643 TNFRSF6BO95407 300 aa10□□□□□ -0.81
VARS-223ENST00000474643 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
VARS-223ENST00000474643 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
VARS-223ENST00000474643 FABP9Q0Z7S8 132 aa10□□□□□ -0.81
VARS-223ENST00000474643 WFDC2Q14508 124 aa10□□□□□ -0.81
VARS-223ENST00000474643 K7EMI3 77 aa9.99□□□□□ -0.81
VARS-223ENST00000474643 VCYO14598 125 aa9.99□□□□□ -0.81
VARS-223ENST00000474643 SCO1O75880 301 aa9.99□□□□□ -0.81
VARS-223ENST00000474643 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
VARS-223ENST00000474643 RPS10P46783 165 aaKnown RBP9.99□□□□□ -0.81
VARS-223ENST00000474643 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
VARS-223ENST00000474643 CLPSL2Q6UWE3 100 aa9.99□□□□□ -0.81
VARS-223ENST00000474643 C14orf177Q52M58 125 aa9.98□□□□□ -0.81
VARS-223ENST00000474643 ALKBH7Q9BT30 221 aaPredicted RBP9.98□□□□□ -0.81
VARS-223ENST00000474643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
VARS-223ENST00000474643 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
VARS-223ENST00000474643 FCER1GP30273 86 aa9.97□□□□□ -0.81
VARS-223ENST00000474643 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
VARS-223ENST00000474643 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
VARS-223ENST00000474643 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
VARS-223ENST00000474643 FAT1Q14517 4588 aa9.97□□□□□ -0.81
VARS-223ENST00000474643 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.81
VARS-223ENST00000474643 NPYP01303 97 aa9.96□□□□□ -0.82
VARS-223ENST00000474643 MIAQ16674 131 aa9.96□□□□□ -0.82
VARS-223ENST00000474643 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
VARS-223ENST00000474643 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
VARS-223ENST00000474643 MAP1LC3AQ9H492 121 aa9.96□□□□□ -0.82
VARS-223ENST00000474643 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.82
VARS-223ENST00000474643 VPS13BQ7Z7G8 4022 aa9.96□□□□□ -0.82
VARS-223ENST00000474643 A0A1B0GUV1 79 aa9.95□□□□□ -0.82
VARS-223ENST00000474643 J3QL48 77 aa9.95□□□□□ -0.82
VARS-223ENST00000474643 REG3AQ06141 175 aa9.95□□□□□ -0.82
VARS-223ENST00000474643 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
VARS-223ENST00000474643 LINC00528Q8N1L1 170 aa9.95□□□□□ -0.82
VARS-223ENST00000474643 SMIM2Q9BVW6 85 aa9.95□□□□□ -0.82
VARS-223ENST00000474643 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
VARS-223ENST00000474643 H7C423 109 aa9.94□□□□□ -0.82
VARS-223ENST00000474643 TSHBP01222 138 aa9.94□□□□□ -0.82
VARS-223ENST00000474643 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
VARS-223ENST00000474643 TMEM101Q96IK0 257 aa9.94□□□□□ -0.82
VARS-223ENST00000474643 SRRM2Q9UQ35 2752 aaKnown RBP9.94□□□□□ -0.82
VARS-223ENST00000474643 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
VARS-223ENST00000474643 LINC01546A6NGU7 62 aa9.93□□□□□ -0.82
VARS-223ENST00000474643 TRGC2P03986 189 aa9.93□□□□□ -0.82
VARS-223ENST00000474643 G0S2P27469 103 aa9.93□□□□□ -0.82
VARS-223ENST00000474643 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
VARS-223ENST00000474643 Q8N8P6 123 aa9.93□□□□□ -0.82
VARS-223ENST00000474643 IGLV10-54A0A075B6I4 117 aa9.92□□□□□ -0.82
VARS-223ENST00000474643 FGF6P10767 208 aa9.92□□□□□ -0.82
VARS-223ENST00000474643 RAB5BP61020 215 aa9.92□□□□□ -0.82
VARS-223ENST00000474643 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
VARS-223ENST00000474643 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
VARS-223ENST00000474643 DGAT2L7PQ6IED9 249 aa9.91□□□□□ -0.82
VARS-223ENST00000474643 Q6ZSA8 131 aa9.91□□□□□ -0.82
VARS-223ENST00000474643 OR5A1Q8NGJ0 315 aa9.91□□□□□ -0.82
VARS-223ENST00000474643 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 ESDP10768 282 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 ZNF25P17030 456 aaPredicted RBP9.9□□□□□ -0.82
VARS-223ENST00000474643 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 ORMDL2Q53FV1 153 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 C18orf32Q8TCD1 76 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 TMEM18Q96B42 140 aa9.9□□□□□ -0.82
VARS-223ENST00000474643 PRSS3P2Q8NHM4 247 aa9.89□□□□□ -0.83
VARS-223ENST00000474643 CHAC1Q9BUX1 264 aa9.89□□□□□ -0.83
VARS-223ENST00000474643 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
VARS-223ENST00000474643 MYCBP2O75592 4640 aa9.88□□□□□ -0.83
VARS-223ENST00000474643 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
VARS-223ENST00000474643 LOC389332A0A1B0GUA5 103 aa9.87□□□□□ -0.83
VARS-223ENST00000474643 NPSP0C0P6 89 aa9.87□□□□□ -0.83
VARS-223ENST00000474643 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
VARS-223ENST00000474643 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
VARS-223ENST00000474643 TIMM21Q9BVV7 248 aa9.87□□□□□ -0.83
VARS-223ENST00000474643 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
VARS-223ENST00000474643 LINC00614P0C842 121 aa9.86□□□□□ -0.83
VARS-223ENST00000474643 FA2HQ7L5A8 372 aa9.86□□□□□ -0.83
VARS-223ENST00000474643 MRPL52Q86TS9 123 aaKnown RBP9.86□□□□□ -0.83
VARS-223ENST00000474643 AP5S1Q9NUS5 200 aa9.86□□□□□ -0.83
VARS-223ENST00000474643 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
VARS-223ENST00000474643 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
VARS-223ENST00000474643 HERC1Q15751 4861 aa9.85□□□□□ -0.83
VARS-223ENST00000474643 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
VARS-223ENST00000474643 ZNF664Q8N3J9 261 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
VARS-223ENST00000474643 SS18Q15532 418 aa9.83□□□□□ -0.84
VARS-223ENST00000474643 BAGE3Q86Y29 109 aa9.83□□□□□ -0.84
VARS-223ENST00000474643 CIRBP-AS1Q8TBR5 109 aa9.83□□□□□ -0.84
VARS-223ENST00000474643 CHCHD10Q8WYQ3 142 aaPredicted RBP9.83□□□□□ -0.84
VARS-223ENST00000474643 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms