RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 TMEM243Q9BU79 118 aa6.13□□□□□ -1.43
SMC4-213ENST00000472282 TRBV24-1A0A075B6N3 115 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 TMEM262E9PQX1 116 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 UBE2L6O14933 153 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 TSHBP01222 138 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 PKIAP61925 76 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 KIAA1644Q3SXP7 199 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 COX19Q49B96 90 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 C20orf78Q9BR46 151 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 CHCHD7Q9BUK0 85 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 SMIM2Q9BVW6 85 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 GNB1LQ9BYB4 327 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 Q9HAA7 133 aa6.12□□□□□ -1.43
SMC4-213ENST00000472282 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.11□□□□□ -1.43
SMC4-213ENST00000472282 IGKV2-29A2NJV5 120 aaPredicted RBP6.11□□□□□ -1.43
SMC4-213ENST00000472282 IBA57-AS1B1ANH7 110 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 VCYO14598 125 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 PHOX2AO14813 284 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
SMC4-213ENST00000472282 CBLN2Q8IUK8 224 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 Q8N976 141 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 LAMTOR2Q9Y2Q5 125 aa6.11□□□□□ -1.43
SMC4-213ENST00000472282 MT-ND6P03923 174 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 ANGP03950 147 aaKnown RBP6.1□□□□□ -1.43
SMC4-213ENST00000472282 ESDP10768 282 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 FCER1GP30273 86 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 RBX1P62877 108 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 LAGE3Q14657 143 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 KIR2DL4Q99706 377 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 MAP1LC3AQ9H492 121 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 SMCO4Q9NRQ5 59 aa6.1□□□□□ -1.43
SMC4-213ENST00000472282 IGLV4-60A0A075B6I1 120 aa6.09□□□□□ -1.43
SMC4-213ENST00000472282 LOC389332A0A1B0GUA5 103 aa6.09□□□□□ -1.43
SMC4-213ENST00000472282 FABP9Q0Z7S8 132 aa6.09□□□□□ -1.43
SMC4-213ENST00000472282 RNASEKQ6P5S7 137 aaKnown RBP6.09□□□□□ -1.43
SMC4-213ENST00000472282 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
SMC4-213ENST00000472282 NFE4Q86UQ8 179 aa6.09□□□□□ -1.43
SMC4-213ENST00000472282 UBE2WQ96B02 151 aa6.09□□□□□ -1.43
SMC4-213ENST00000472282 A0A087WTM6 91 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 TRAV8-3A0A0A6YYJ7 113 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 A0A1B0GUV1 79 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 H7C423 109 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 TCAPO15273 167 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 CRPP02741 224 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 FGF6P10767 208 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 RNF151Q2KHN1 245 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 AMMECR1LQ6DCA0 310 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
SMC4-213ENST00000472282 PRSS47A8MTI9 375 aa6.07□□□□□ -1.44
SMC4-213ENST00000472282 XGP55808 180 aa6.07□□□□□ -1.44
SMC4-213ENST00000472282 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
SMC4-213ENST00000472282 ENHOQ6UWT2 76 aa6.07□□□□□ -1.44
SMC4-213ENST00000472282 LINC00269Q8N2A0 174 aa6.07□□□□□ -1.44
SMC4-213ENST00000472282 Q8N8P6 123 aa6.07□□□□□ -1.44
SMC4-213ENST00000472282 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
SMC4-213ENST00000472282 IGKV2D-24A0A075B6R9 120 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 PSCAO43653 123 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 SCO1O75880 301 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 ZNF25P17030 456 aaPredicted RBP6.06□□□□□ -1.44
SMC4-213ENST00000472282 RAB5AP20339 215 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 IFI27P40305 119 aaPredicted RBP6.06□□□□□ -1.44
SMC4-213ENST00000472282 RPL39P62891 51 aaKnown RBP6.06□□□□□ -1.44
SMC4-213ENST00000472282 REG3AQ06141 175 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 Q0VG73 95 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 PRR34Q9NV39 138 aa6.06□□□□□ -1.44
SMC4-213ENST00000472282 IGKV3OR2-268A0A0C4DH90 116 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 MIAQ16674 131 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 MRPL52Q86TS9 123 aaKnown RBP6.05□□□□□ -1.44
SMC4-213ENST00000472282 OR5A1Q8NGJ0 315 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 TMEM18Q96B42 140 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 RMI2Q96E14 147 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 TMEM101Q96IK0 257 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 NXT2Q9NPJ8 142 aaKnown RBP6.05□□□□□ -1.44
SMC4-213ENST00000472282 UBE2D4Q9Y2X8 147 aa6.05□□□□□ -1.44
SMC4-213ENST00000472282 FAT1Q14517 4588 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 LRCOL1A6NCL2 159 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 HAMPP81172 84 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 SMAGPQ0VAQ4 97 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 DGAT2L7PQ6IED9 249 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 C1orf43Q9BWL3 253 aa6.04□□□□□ -1.44
SMC4-213ENST00000472282 ATP6V1G1O75348 118 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 ORMDL2Q53FV1 153 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
SMC4-213ENST00000472282 Q6ZUT4 128 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 PRSS3P2Q8NHM4 247 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 C18orf32Q8TCD1 76 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 TIMM21Q9BVV7 248 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 COX11Q9Y6N1 276 aa6.03□□□□□ -1.44
SMC4-213ENST00000472282 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 COLCA2A8K830 154 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 K7EMI3 77 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 WFDC2Q14508 124 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 FA2HQ7L5A8 372 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 ZNF664Q8N3J9 261 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms