RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
SORT1-203ENST00000471996 UBE2D1P51668 147 aa11.38□□□□□ -0.59
SORT1-203ENST00000471996 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
SORT1-203ENST00000471996 MEF2BQ02080 365 aaPredicted RBP11.38□□□□□ -0.59
SORT1-203ENST00000471996 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
SORT1-203ENST00000471996 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
SORT1-203ENST00000471996 A0A087WZ39 114 aa11.37□□□□□ -0.59
SORT1-203ENST00000471996 APCSP02743 223 aa11.37□□□□□ -0.59
SORT1-203ENST00000471996 GATD1Q8NB37 220 aa11.37□□□□□ -0.59
SORT1-203ENST00000471996 OR2D3Q8NGH3 330 aa11.37□□□□□ -0.59
SORT1-203ENST00000471996 BIN3Q9NQY0 253 aa11.37□□□□□ -0.59
SORT1-203ENST00000471996 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
SORT1-203ENST00000471996 SS18Q15532 418 aa11.36□□□□□ -0.59
SORT1-203ENST00000471996 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
SORT1-203ENST00000471996 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
SORT1-203ENST00000471996 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
SORT1-203ENST00000471996 LYZL1Q6UWQ5 148 aa11.35□□□□□ -0.59
SORT1-203ENST00000471996 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
SORT1-203ENST00000471996 CAMK2N2Q96S95 79 aa11.35□□□□□ -0.59
SORT1-203ENST00000471996 GNG4P50150 75 aa11.34□□□□□ -0.59
SORT1-203ENST00000471996 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
SORT1-203ENST00000471996 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
SORT1-203ENST00000471996 C9orf62Q8N4C0 152 aa11.33□□□□□ -0.6
SORT1-203ENST00000471996 TSKUQ8WUA8 353 aa11.33□□□□□ -0.6
SORT1-203ENST00000471996 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
SORT1-203ENST00000471996 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
SORT1-203ENST00000471996 MALP21145 153 aa11.32□□□□□ -0.6
SORT1-203ENST00000471996 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
SORT1-203ENST00000471996 C2orf48Q96LS8 159 aa11.32□□□□□ -0.6
SORT1-203ENST00000471996 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
SORT1-203ENST00000471996 OPRPNQ99935 248 aaPredicted RBP11.31□□□□□ -0.6
SORT1-203ENST00000471996 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
SORT1-203ENST00000471996 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
SORT1-203ENST00000471996 TSPAN13O95857 204 aa11.3□□□□□ -0.6
SORT1-203ENST00000471996 CDC42SE2Q9NRR3 84 aa11.3□□□□□ -0.6
SORT1-203ENST00000471996 COX7A2LO14548 114 aa11.29□□□□□ -0.6
SORT1-203ENST00000471996 ESDP10768 282 aa11.29□□□□□ -0.6
SORT1-203ENST00000471996 TWIST1Q15672 202 aa11.29□□□□□ -0.6
SORT1-203ENST00000471996 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
SORT1-203ENST00000471996 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
SORT1-203ENST00000471996 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 FAM168BA1KXE4 195 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 I3L3M4 83 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 PMCHP20382 165 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 CTRLP40313 264 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 CNFNQ9BYD5 112 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 FSIP2Q5CZC0 6907 aa11.27□□□□□ -0.61
SORT1-203ENST00000471996 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
SORT1-203ENST00000471996 MRPL52Q86TS9 123 aaKnown RBP11.26□□□□□ -0.61
SORT1-203ENST00000471996 MRAP2Q96G30 205 aa11.26□□□□□ -0.61
SORT1-203ENST00000471996 C1orf196B1AJZ1 125 aa11.25□□□□□ -0.61
SORT1-203ENST00000471996 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
SORT1-203ENST00000471996 ALKAL2Q6UX46 152 aa11.25□□□□□ -0.61
SORT1-203ENST00000471996 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
SORT1-203ENST00000471996 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
SORT1-203ENST00000471996 CRCT1Q9UGL9 99 aa11.25□□□□□ -0.61
SORT1-203ENST00000471996 TSHBP01222 138 aa11.24□□□□□ -0.61
SORT1-203ENST00000471996 TEX261Q6UWH6 196 aa11.24□□□□□ -0.61
SORT1-203ENST00000471996 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
SORT1-203ENST00000471996 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
SORT1-203ENST00000471996 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
SORT1-203ENST00000471996 SPAG11BQ08648 103 aa11.22□□□□□ -0.61
SORT1-203ENST00000471996 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
SORT1-203ENST00000471996 OCC1Q8TAD7 63 aa11.22□□□□□ -0.61
SORT1-203ENST00000471996 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
SORT1-203ENST00000471996 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
SORT1-203ENST00000471996 MRPL35Q9NZE8 188 aaKnown RBP11.22□□□□□ -0.61
SORT1-203ENST00000471996 FAM210AQ96ND0 272 aa11.21□□□□□ -0.61
SORT1-203ENST00000471996 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
SORT1-203ENST00000471996 UBE2BP63146 152 aa11.2□□□□□ -0.62
SORT1-203ENST00000471996 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
SORT1-203ENST00000471996 KRTAP7-1Q8IUC3 87 aa11.2□□□□□ -0.62
SORT1-203ENST00000471996 K7EN84 100 aa11.19□□□□□ -0.62
SORT1-203ENST00000471996 FAM231DQ6ZW35 169 aa11.19□□□□□ -0.62
SORT1-203ENST00000471996 C7orf77A4D0Y5 90 aa11.18□□□□□ -0.62
SORT1-203ENST00000471996 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
SORT1-203ENST00000471996 RNASE7Q9H1E1 156 aaKnown RBP11.18□□□□□ -0.62
SORT1-203ENST00000471996 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
SORT1-203ENST00000471996 F8WDY8 70 aa11.17□□□□□ -0.62
SORT1-203ENST00000471996 M0QXV9 152 aa11.17□□□□□ -0.62
SORT1-203ENST00000471996 ZNF861PO60384 105 aa11.17□□□□□ -0.62
SORT1-203ENST00000471996 OR10D4PQ8NGN7 298 aa11.17□□□□□ -0.62
SORT1-203ENST00000471996 EIF5A2Q9GZV4 153 aaKnown RBP11.17□□□□□ -0.62
SORT1-203ENST00000471996 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
SORT1-203ENST00000471996 A8MWL6 223 aa11.16□□□□□ -0.62
SORT1-203ENST00000471996 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
SORT1-203ENST00000471996 CT83Q5H943 113 aa11.16□□□□□ -0.62
SORT1-203ENST00000471996 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
SORT1-203ENST00000471996 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
SORT1-203ENST00000471996 POLR2KP53803 58 aaKnown RBP11.15□□□□□ -0.62
SORT1-203ENST00000471996 GAGE2EQ4V326 116 aa11.15□□□□□ -0.62
SORT1-203ENST00000471996 RNASE13Q5GAN3 156 aaKnown RBP11.15□□□□□ -0.62
SORT1-203ENST00000471996 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
SORT1-203ENST00000471996 GAGE2DQ9UEU5 116 aa11.15□□□□□ -0.62
SORT1-203ENST00000471996 NDUFA1O15239 70 aa11.14□□□□□ -0.63
SORT1-203ENST00000471996 TMEM241Q24JQ0 296 aa11.14□□□□□ -0.63
SORT1-203ENST00000471996 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
SORT1-203ENST00000471996 A0A087X002 238 aa11.13□□□□□ -0.63
SORT1-203ENST00000471996 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
SORT1-203ENST00000471996 A0A1B0GVG6 124 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms