RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
COL4A5-203ENST00000470339 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
COL4A5-203ENST00000470339 GAGE6Q13070 117 aa10.42□□□□□ -0.74
COL4A5-203ENST00000470339 LINC00518Q8N0U6 118 aa10.42□□□□□ -0.74
COL4A5-203ENST00000470339 TGP01266 2768 aa10.42□□□□□ -0.74
COL4A5-203ENST00000470339 TRAV8-6A0A0B4J262 113 aa10.41□□□□□ -0.74
COL4A5-203ENST00000470339 F8VRH5 84 aa10.41□□□□□ -0.74
COL4A5-203ENST00000470339 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-203ENST00000470339 TEX43Q6ZNM6 134 aa10.41□□□□□ -0.74
COL4A5-203ENST00000470339 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
COL4A5-203ENST00000470339 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-203ENST00000470339 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
COL4A5-203ENST00000470339 CHTOPQ9Y3Y2 248 aaKnown RBP10.41□□□□□ -0.74
COL4A5-203ENST00000470339 IGLL5B9A064 214 aa10.4□□□□□ -0.74
COL4A5-203ENST00000470339 PLNP26678 52 aa10.4□□□□□ -0.74
COL4A5-203ENST00000470339 ESRGQ1W209 222 aa10.4□□□□□ -0.74
COL4A5-203ENST00000470339 C12orf57Q99622 126 aa10.4□□□□□ -0.74
COL4A5-203ENST00000470339 C2orf88Q9BSF0 95 aa10.4□□□□□ -0.74
COL4A5-203ENST00000470339 NUPR2A6NF83 97 aa10.39□□□□□ -0.75
COL4A5-203ENST00000470339 TMEM262E9PQX1 116 aa10.39□□□□□ -0.75
COL4A5-203ENST00000470339 DPM2O94777 84 aa10.39□□□□□ -0.75
COL4A5-203ENST00000470339 TCTAP57738 103 aa10.39□□□□□ -0.75
COL4A5-203ENST00000470339 LCE2DQ5TA82 110 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-203ENST00000470339 Q6ZUT4 128 aa10.39□□□□□ -0.75
COL4A5-203ENST00000470339 MRPL35Q9NZE8 188 aaKnown RBP10.39□□□□□ -0.75
COL4A5-203ENST00000470339 RBX1P62877 108 aa10.38□□□□□ -0.75
COL4A5-203ENST00000470339 KLK5Q9Y337 293 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-203ENST00000470339 IGKCP01834 107 aa10.37□□□□□ -0.75
COL4A5-203ENST00000470339 S100A12P80511 92 aa10.37□□□□□ -0.75
COL4A5-203ENST00000470339 PMCHL2Q9BQD1 86 aa10.37□□□□□ -0.75
COL4A5-203ENST00000470339 IGLV4-60A0A075B6I1 120 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 TRAV9-2A0A087WT02 112 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 CCL18P55774 89 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 MPV17L2Q567V2 206 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 ZC2HC1BQ5TFG8 222 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 FAM19A3Q7Z5A8 133 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
COL4A5-203ENST00000470339 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
COL4A5-203ENST00000470339 IGLC3P0DOY3 106 aa10.35□□□□□ -0.75
COL4A5-203ENST00000470339 UBE2D1P51668 147 aa10.35□□□□□ -0.75
COL4A5-203ENST00000470339 SEC11AP67812 179 aa10.35□□□□□ -0.75
COL4A5-203ENST00000470339 CDPF1Q6NVV7 123 aa10.35□□□□□ -0.75
COL4A5-203ENST00000470339 VAMP8Q9BV40 100 aa10.35□□□□□ -0.75
COL4A5-203ENST00000470339 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
COL4A5-203ENST00000470339 CCL25O15444 150 aa10.34□□□□□ -0.75
COL4A5-203ENST00000470339 RNASE13Q5GAN3 156 aaKnown RBP10.34□□□□□ -0.75
COL4A5-203ENST00000470339 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
COL4A5-203ENST00000470339 APLNQ9ULZ1 77 aa10.34□□□□□ -0.75
COL4A5-203ENST00000470339 DNAH7Q8WXX0 4024 aa10.33□□□□□ -0.76
COL4A5-203ENST00000470339 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
COL4A5-203ENST00000470339 HSBP1L1C9JCN9 74 aa10.33□□□□□ -0.76
COL4A5-203ENST00000470339 DYNC2H1Q8NCM8 4307 aaKnown RBP10.33□□□□□ -0.76
COL4A5-203ENST00000470339 A0A0J9YXV3 536 aa10.32□□□□□ -0.76
COL4A5-203ENST00000470339 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
COL4A5-203ENST00000470339 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
COL4A5-203ENST00000470339 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
COL4A5-203ENST00000470339 LINC01556Q5JQF7 62 aa10.31□□□□□ -0.76
COL4A5-203ENST00000470339 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
COL4A5-203ENST00000470339 ANGP03950 147 aaKnown RBP10.3□□□□□ -0.76
COL4A5-203ENST00000470339 DNAH10OSP0CZ25 163 aa10.3□□□□□ -0.76
COL4A5-203ENST00000470339 HERVK_113P63121 156 aa10.3□□□□□ -0.76
COL4A5-203ENST00000470339 LINC00242Q5T6M2 205 aa10.3□□□□□ -0.76
COL4A5-203ENST00000470339 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
COL4A5-203ENST00000470339 GEMIN7Q9H840 131 aaKnown RBP10.3□□□□□ -0.76
COL4A5-203ENST00000470339 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 TRAV13-1A0A0B4J241 112 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 LINC00959A0A1B0GUT2 108 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 hDV102S1A0JD36 115 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 PAM16Q9Y3D7 125 aa10.29□□□□□ -0.76
COL4A5-203ENST00000470339 SIVA1O15304 175 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 REG3AQ06141 175 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 SS18Q15532 418 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 SPATA45Q537H7 98 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 STPG4Q8N801 248 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 WWC2-AS2Q96NR7 200 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
COL4A5-203ENST00000470339 K7EP13 123 aa10.27□□□□□ -0.77
COL4A5-203ENST00000470339 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
COL4A5-203ENST00000470339 HERVK_113P61574 105 aa10.27□□□□□ -0.77
COL4A5-203ENST00000470339 TMEM170BQ5T4T1 132 aa10.27□□□□□ -0.77
COL4A5-203ENST00000470339 Q8N3U1 123 aa10.27□□□□□ -0.77
COL4A5-203ENST00000470339 MUC7Q8TAX7 377 aa10.27□□□□□ -0.77
COL4A5-203ENST00000470339 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
COL4A5-203ENST00000470339 IGHV3-30P01768 117 aa10.26□□□□□ -0.77
COL4A5-203ENST00000470339 IGHV3-33P01772 117 aa10.26□□□□□ -0.77
COL4A5-203ENST00000470339 IGHV3-30-3P0DP02 117 aa10.26□□□□□ -0.77
COL4A5-203ENST00000470339 IGHV3-30-5P0DP03 117 aa10.26□□□□□ -0.77
COL4A5-203ENST00000470339 TRAV8-4A0A0B4J246 113 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 E9PLD3 99 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 H3BRM9 83 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 COX6A2Q02221 97 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
COL4A5-203ENST00000470339 IGKV3OR2-268A0A0C4DH90 116 aa10.24□□□□□ -0.77
COL4A5-203ENST00000470339 MIAQ16674 131 aa10.24□□□□□ -0.77
COL4A5-203ENST00000470339 ENHOQ6UWT2 76 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms