RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 EIF5A2Q9GZV4 153 aaKnown RBP8.34□□□□□ -1.07
CPSF4-210ENST00000469897 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
CPSF4-210ENST00000469897 A0A1B0GUT8 65 aa8.33□□□□□ -1.08
CPSF4-210ENST00000469897 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
CPSF4-210ENST00000469897 POLR2KP53803 58 aaKnown RBP8.33□□□□□ -1.08
CPSF4-210ENST00000469897 TSKUQ8WUA8 353 aa8.33□□□□□ -1.08
CPSF4-210ENST00000469897 MRAP2Q96G30 205 aa8.33□□□□□ -1.08
CPSF4-210ENST00000469897 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
CPSF4-210ENST00000469897 hCG_2014768A0A024R1R8 64 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 SS18Q15532 418 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 LINC01551Q86U37 167 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 AKAP14Q86UN6 197 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 AMN1Q8IY45 258 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 SMIM7Q9BQ49 75 aa8.32□□□□□ -1.08
CPSF4-210ENST00000469897 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
CPSF4-210ENST00000469897 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 ZNF727A8MUV8 499 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 VCYO14598 125 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 PRR3P79522 188 aaKnown RBP8.3□□□□□ -1.08
CPSF4-210ENST00000469897 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 MRPL52Q86TS9 123 aaKnown RBP8.3□□□□□ -1.08
CPSF4-210ENST00000469897 FAM210AQ96ND0 272 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 OSTCQ9NRP0 149 aa8.3□□□□□ -1.08
CPSF4-210ENST00000469897 SRP19P09132 144 aaKnown RBP8.29□□□□□ -1.08
CPSF4-210ENST00000469897 SYCNQ0VAF6 134 aa8.29□□□□□ -1.08
CPSF4-210ENST00000469897 CARD19Q96LW7 228 aa8.29□□□□□ -1.08
CPSF4-210ENST00000469897 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
CPSF4-210ENST00000469897 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
CPSF4-210ENST00000469897 C7orf77A4D0Y5 90 aa8.28□□□□□ -1.08
CPSF4-210ENST00000469897 FCER1GP30273 86 aa8.28□□□□□ -1.08
CPSF4-210ENST00000469897 RIGQ13278 110 aa8.28□□□□□ -1.08
CPSF4-210ENST00000469897 NUP35Q8NFH5 326 aa8.28□□□□□ -1.08
CPSF4-210ENST00000469897 V9GYV3 84 aa8.28□□□□□ -1.08
CPSF4-210ENST00000469897 IGLV4-69A0A075B6H9 119 aa8.27□□□□□ -1.09
CPSF4-210ENST00000469897 MALP21145 153 aa8.27□□□□□ -1.09
CPSF4-210ENST00000469897 ODF1Q14990 250 aa8.27□□□□□ -1.09
CPSF4-210ENST00000469897 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
CPSF4-210ENST00000469897 C1orf196B1AJZ1 125 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 CAMPP49913 170 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 TMEM241Q24JQ0 296 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 NRACQ8N912 160 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
CPSF4-210ENST00000469897 TRAV13-1A0A0B4J241 112 aa8.25□□□□□ -1.09
CPSF4-210ENST00000469897 COX7A2LO14548 114 aa8.25□□□□□ -1.09
CPSF4-210ENST00000469897 PPP1R17O96001 155 aa8.25□□□□□ -1.09
CPSF4-210ENST00000469897 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
CPSF4-210ENST00000469897 SRSF9Q13242 221 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPSF4-210ENST00000469897 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
CPSF4-210ENST00000469897 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
CPSF4-210ENST00000469897 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 PTTG1IPP53801 180 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
CPSF4-210ENST00000469897 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
CPSF4-210ENST00000469897 Q6ZRP5 223 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 ISOC2Q96AB3 205 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 NAT8BQ9UHF3 227 aa8.24□□□□□ -1.09
CPSF4-210ENST00000469897 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
CPSF4-210ENST00000469897 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
CPSF4-210ENST00000469897 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
CPSF4-210ENST00000469897 FAM104BQ5XKR9 115 aa8.23□□□□□ -1.09
CPSF4-210ENST00000469897 CAMK2N2Q96S95 79 aa8.23□□□□□ -1.09
CPSF4-210ENST00000469897 C9JQL5 133 aa8.22□□□□□ -1.09
CPSF4-210ENST00000469897 SMAGPQ0VAQ4 97 aa8.22□□□□□ -1.09
CPSF4-210ENST00000469897 FAM74A3Q4VXF1 159 aa8.22□□□□□ -1.09
CPSF4-210ENST00000469897 TNXBP22105 4242 aa8.21□□□□□ -1.09
CPSF4-210ENST00000469897 PPP1R2P9O14990 202 aa8.21□□□□□ -1.1
CPSF4-210ENST00000469897 CKS2P33552 79 aa8.21□□□□□ -1.1
CPSF4-210ENST00000469897 ADIRFQ15847 76 aa8.21□□□□□ -1.1
CPSF4-210ENST00000469897 REG3GQ6UW15 175 aa8.21□□□□□ -1.1
CPSF4-210ENST00000469897 Q6ZUT4 128 aa8.21□□□□□ -1.1
CPSF4-210ENST00000469897 TMEM18Q96B42 140 aa8.21□□□□□ -1.1
CPSF4-210ENST00000469897 OPRPNQ99935 248 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-210ENST00000469897 TRBV24-1A0A075B6N3 115 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 LINC00862A6NCI5 91 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-210ENST00000469897 APOMO95445 188 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 SRSF3P84103 164 aaKnown RBP8.2□□□□□ -1.1
CPSF4-210ENST00000469897 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-210ENST00000469897 C2orf48Q96LS8 159 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
CPSF4-210ENST00000469897 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
CPSF4-210ENST00000469897 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
CPSF4-210ENST00000469897 NAT8Q9UHE5 227 aa8.19□□□□□ -1.1
CPSF4-210ENST00000469897 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
CPSF4-210ENST00000469897 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
CPSF4-210ENST00000469897 A0A1B0GW15 77 aa8.17□□□□□ -1.1
CPSF4-210ENST00000469897 TCAPO15273 167 aa8.17□□□□□ -1.1
CPSF4-210ENST00000469897 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
CPSF4-210ENST00000469897 PEA15Q15121 130 aa8.17□□□□□ -1.1
CPSF4-210ENST00000469897 MRPL54Q6P161 138 aaKnown RBP8.17□□□□□ -1.1
CPSF4-210ENST00000469897 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms