RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 SMKR1H3BMG3 65 aa13.71□□□□□ -0.21
RTN4R-205ENST00000469601 SDIM1Q6ZPB5 146 aa13.71□□□□□ -0.21
RTN4R-205ENST00000469601 NRACQ8N912 160 aa13.71□□□□□ -0.21
RTN4R-205ENST00000469601 FAT1Q14517 4588 aa13.7□□□□□ -0.22
RTN4R-205ENST00000469601 MRPL51Q4U2R6 128 aaKnown RBP13.7□□□□□ -0.22
RTN4R-205ENST00000469601 HBBP68871 147 aa13.69□□□□□ -0.22
RTN4R-205ENST00000469601 SS18Q15532 418 aa13.69□□□□□ -0.22
RTN4R-205ENST00000469601 C15orf56Q8N910 161 aa13.69□□□□□ -0.22
RTN4R-205ENST00000469601 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
RTN4R-205ENST00000469601 LINC00959A0A1B0GUT2 108 aa13.68□□□□□ -0.22
RTN4R-205ENST00000469601 TCAPO15273 167 aa13.68□□□□□ -0.22
RTN4R-205ENST00000469601 CKS2P33552 79 aa13.68□□□□□ -0.22
RTN4R-205ENST00000469601 ZNF664Q8N3J9 261 aa13.68□□□□□ -0.22
RTN4R-205ENST00000469601 CDC42SE2Q9NRR3 84 aa13.68□□□□□ -0.22
RTN4R-205ENST00000469601 TRBV24-1A0A075B6N3 115 aa13.67□□□□□ -0.22
RTN4R-205ENST00000469601 TMEM18Q96B42 140 aa13.67□□□□□ -0.22
RTN4R-205ENST00000469601 CSDC2Q9Y534 153 aaKnown RBP13.67□□□□□ -0.22
RTN4R-205ENST00000469601 SLPIP03973 132 aa13.66□□□□□ -0.22
RTN4R-205ENST00000469601 XCL1P47992 114 aa13.66□□□□□ -0.22
RTN4R-205ENST00000469601 RPL32P62910 135 aaKnown RBP13.66□□□□□ -0.22
RTN4R-205ENST00000469601 FOXI1Q12951 378 aa13.66□□□□□ -0.22
RTN4R-205ENST00000469601 MRPL54Q6P161 138 aaKnown RBP13.66□□□□□ -0.22
RTN4R-205ENST00000469601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.66□□□□□ -0.22
RTN4R-205ENST00000469601 GVQW2A0A096LPI5 108 aaPredicted RBP13.65□□□□□ -0.22
RTN4R-205ENST00000469601 CCL25O15444 150 aa13.65□□□□□ -0.22
RTN4R-205ENST00000469601 PNRC1Q12796 327 aaPredicted RBP13.65□□□□□ -0.22
RTN4R-205ENST00000469601 ATP5L2Q7Z4Y8 100 aa13.65□□□□□ -0.22
RTN4R-205ENST00000469601 A0A1B0GXF2 115 aa13.64□□□□□ -0.23
RTN4R-205ENST00000469601 PPBPP02775 128 aa13.64□□□□□ -0.23
RTN4R-205ENST00000469601 HIGD2BQ4VC39 106 aa13.64□□□□□ -0.23
RTN4R-205ENST00000469601 DPH3Q96FX2 82 aa13.64□□□□□ -0.23
RTN4R-205ENST00000469601 TNFRSF6BO95407 300 aa13.63□□□□□ -0.23
RTN4R-205ENST00000469601 CIRBPQ14011 172 aaKnown RBP13.63□□□□□ -0.23
RTN4R-205ENST00000469601 CD164L2Q6UWJ8 174 aa13.63□□□□□ -0.23
RTN4R-205ENST00000469601 IGHV1-58A0A0C4DH39 117 aa13.62□□□□□ -0.23
RTN4R-205ENST00000469601 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
RTN4R-205ENST00000469601 PHOX2AO14813 284 aa13.62□□□□□ -0.23
RTN4R-205ENST00000469601 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
RTN4R-205ENST00000469601 UBE2D4Q9Y2X8 147 aa13.62□□□□□ -0.23
RTN4R-205ENST00000469601 DMBT1Q9UGM3 2413 aaPredicted RBP13.61□□□□□ -0.23
RTN4R-205ENST00000469601 D6R8Y8 96 aa13.61□□□□□ -0.23
RTN4R-205ENST00000469601 MT-ND4LP03901 98 aa13.61□□□□□ -0.23
RTN4R-205ENST00000469601 RPL37AP61513 92 aaKnown RBP13.61□□□□□ -0.23
RTN4R-205ENST00000469601 PKIGQ9Y2B9 76 aa13.61□□□□□ -0.23
RTN4R-205ENST00000469601 PANO1I0J062 215 aa13.6□□□□□ -0.23
RTN4R-205ENST00000469601 J3QL48 77 aa13.6□□□□□ -0.23
RTN4R-205ENST00000469601 ANAPC16Q96DE5 110 aa13.6□□□□□ -0.23
RTN4R-205ENST00000469601 SMIM2Q9BVW6 85 aa13.6□□□□□ -0.23
RTN4R-205ENST00000469601 KRTAP10-4P60372 401 aaPredicted RBP13.59□□□□□ -0.23
RTN4R-205ENST00000469601 ORMDL3Q8N138 153 aa13.59□□□□□ -0.23
RTN4R-205ENST00000469601 FLG2Q5D862 2391 aaPredicted RBP13.59□□□□□ -0.23
RTN4R-205ENST00000469601 DNAH8Q96JB1 4490 aa13.58□□□□□ -0.24
RTN4R-205ENST00000469601 SPACA4Q8TDM5 124 aa13.58□□□□□ -0.24
RTN4R-205ENST00000469601 ZNF561-AS1K7EIQ3 104 aa13.57□□□□□ -0.24
RTN4R-205ENST00000469601 COX6A2Q02221 97 aa13.57□□□□□ -0.24
RTN4R-205ENST00000469601 CLLU1Q5K131 121 aa13.57□□□□□ -0.24
RTN4R-205ENST00000469601 KRTAP29-1A8MX34 341 aaPredicted RBP13.56□□□□□ -0.24
RTN4R-205ENST00000469601 NPYP01303 97 aa13.56□□□□□ -0.24
RTN4R-205ENST00000469601 MALP21145 153 aa13.56□□□□□ -0.24
RTN4R-205ENST00000469601 TMEM136Q6ZRR5 245 aa13.56□□□□□ -0.24
RTN4R-205ENST00000469601 A0A087WYN8 130 aa13.55□□□□□ -0.24
RTN4R-205ENST00000469601 COX7A2LO14548 114 aa13.55□□□□□ -0.24
RTN4R-205ENST00000469601 SPANXA1Q9NS26 97 aa13.55□□□□□ -0.24
RTN4R-205ENST00000469601 VPS13BQ7Z7G8 4022 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 TRAV13-1A0A0B4J241 112 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 CHTF8P0CG12 524 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 RAB5AP20339 215 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 Q6ZUT4 128 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 PRELID3AQ96N28 172 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 LINC00474Q9P2X8 69 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 LAMTOR2Q9Y2Q5 125 aa13.54□□□□□ -0.24
RTN4R-205ENST00000469601 RNASE13Q5GAN3 156 aaKnown RBP13.53□□□□□ -0.24
RTN4R-205ENST00000469601 PRSS3P2Q8NHM4 247 aa13.53□□□□□ -0.24
RTN4R-205ENST00000469601 CARD19Q96LW7 228 aa13.53□□□□□ -0.24
RTN4R-205ENST00000469601 PLAC8Q9NZF1 115 aa13.53□□□□□ -0.24
RTN4R-205ENST00000469601 RPL39P62891 51 aaKnown RBP13.52□□□□□ -0.25
RTN4R-205ENST00000469601 APOMO95445 188 aa13.51□□□□□ -0.25
RTN4R-205ENST00000469601 MRPS36P82909 103 aaKnown RBP13.51□□□□□ -0.25
RTN4R-205ENST00000469601 SYCNQ0VAF6 134 aa13.51□□□□□ -0.25
RTN4R-205ENST00000469601 MAJINQ3KP22 176 aa13.51□□□□□ -0.25
RTN4R-205ENST00000469601 IGKV2-24A0A0C4DH68 120 aa13.5□□□□□ -0.25
RTN4R-205ENST00000469601 OXTP01178 125 aa13.5□□□□□ -0.25
RTN4R-205ENST00000469601 UQCC3Q6UW78 93 aa13.5□□□□□ -0.25
RTN4R-205ENST00000469601 C7orf33Q8WU49 177 aa13.5□□□□□ -0.25
RTN4R-205ENST00000469601 PRSS47A8MTI9 375 aa13.49□□□□□ -0.25
RTN4R-205ENST00000469601 LINC00526Q96FQ7 95 aa13.49□□□□□ -0.25
RTN4R-205ENST00000469601 MAP1LC3AQ9H492 121 aa13.49□□□□□ -0.25
RTN4R-205ENST00000469601 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
RTN4R-205ENST00000469601 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
RTN4R-205ENST00000469601 IMMP2LQ96T52 175 aa13.47□□□□□ -0.25
RTN4R-205ENST00000469601 IGLV4-69A0A075B6H9 119 aa13.46□□□□□ -0.25
RTN4R-205ENST00000469601 A0A096LNI7 61 aa13.46□□□□□ -0.25
RTN4R-205ENST00000469601 C5orf38Q86SI9 138 aa13.46□□□□□ -0.25
RTN4R-205ENST00000469601 STPG4Q8N801 248 aa13.46□□□□□ -0.25
RTN4R-205ENST00000469601 PYGO1Q9Y3Y4 419 aa13.46□□□□□ -0.25
RTN4R-205ENST00000469601 IFITM10A6NMD0 228 aa13.45□□□□□ -0.26
RTN4R-205ENST00000469601 C2orf48Q96LS8 159 aa13.45□□□□□ -0.26
RTN4R-205ENST00000469601 CAMK2N2Q96S95 79 aa13.45□□□□□ -0.26
RTN4R-205ENST00000469601 TMEM218A2RU14 115 aa13.44□□□□□ -0.26
RTN4R-205ENST00000469601 OR10D4PQ8NGN7 298 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms