RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 COX14Q96I36 57 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 DPY30Q9C005 99 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 AP4S1Q9Y587 144 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 ARFGEF3Q5TH69 2177 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 CNTRLQ7Z7A1 2325 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 BDP1A6H8Y1 2624 aa2.4□□□□□ -2.02
SCFD1-205ENST00000469043 UNC80Q8N2C7 3258 aa2.4□□□□□ -2.02
SCFD1-205ENST00000469043 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 PIGBOS1A0A0B4J2F0 54 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 C10orf142B7Z368 130 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 H3BRN7 92 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 IL7P13232 177 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 RBM3P98179 157 aaKnown RBP2.4□□□□□ -2.03
SCFD1-205ENST00000469043 RPL7L1Q6DKI1 246 aaKnown RBP2.4□□□□□ -2.03
SCFD1-205ENST00000469043 UNQ5815/PRO19632Q6UWF5 114 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 LINC00052Q96N35 136 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 CNOT1A5YKK6 2376 aaKnown RBP2.4□□□□□ -2.03
SCFD1-205ENST00000469043 XIRP2A4UGR9 3374 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 EYSQ5T1H1 3165 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 EXPH5Q8NEV8 1989 aa2.4□□□□□ -2.03
SCFD1-205ENST00000469043 A6NIN4 97 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 SLC25A6P12236 298 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 COX7CP15954 63 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 UBE2G1P62253 170 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 DCDP81605 110 aaKnown RBP2.39□□□□□ -2.03
SCFD1-205ENST00000469043 RHOHQ15669 191 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 SLC48A1Q6P1K1 146 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 C5orf38Q86SI9 138 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 DEFB123Q8N688 67 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 DPH3P1Q9H4G8 78 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 TMEM106BQ9NUM4 274 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 SCP2D1Q9UJQ7 156 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 FAM186AA6NE01 2351 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 AHCTF1Q8WYP5 2266 aa2.39□□□□□ -2.03
SCFD1-205ENST00000469043 RIF1Q5UIP0 2472 aaKnown RBP2.39□□□□□ -2.03
SCFD1-205ENST00000469043 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-205ENST00000469043 ICE1Q9Y2F5 2266 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 TRGV4A0A0C4DH28 118 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 UBE2L5PA0A1B0GUS4 154 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 TMEM30CPA0ZSE6 113 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 RBAKDNA6NC62 111 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 IGHV3-33P01772 117 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 LINC00032P0C843 101 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 IL9P15248 144 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 CBLN1P23435 193 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 SNCAP37840 140 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 ATP5EP56381 51 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-205ENST00000469043 UBE2L3P68036 154 aaKnown RBP2.38□□□□□ -2.03
SCFD1-205ENST00000469043 OTOGLQ3ZCN5 2332 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 SBSPONQ8IVN8 264 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 VAMP8Q9BV40 100 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 COL6A3P12111 3177 aa2.38□□□□□ -2.03
SCFD1-205ENST00000469043 EP300Q09472 2414 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-205ENST00000469043 SPTY2D1-AS1A0A0U1RR47 76 aa2.37□□□□□ -2.03
SCFD1-205ENST00000469043 H3BRM9 83 aa2.37□□□□□ -2.03
SCFD1-205ENST00000469043 IGKCP01834 107 aa2.37□□□□□ -2.03
SCFD1-205ENST00000469043 TFF1P04155 84 aa2.37□□□□□ -2.03
SCFD1-205ENST00000469043 C9orf116Q5BN46 136 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-205ENST00000469043 FAM74A1Q5RGS3 127 aa2.37□□□□□ -2.03
SCFD1-205ENST00000469043 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
SCFD1-205ENST00000469043 INTS1Q8N201 2190 aaKnown RBP2.37□□□□□ -2.03
SCFD1-205ENST00000469043 PTPRZ1P23471 2315 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-205ENST00000469043 SSSCA1O60232 199 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 MT-ATP8P03928 68 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 RNASE2P10153 161 aaKnown RBP2.36□□□□□ -2.03
SCFD1-205ENST00000469043 RPL38P63173 70 aaKnown RBP2.36□□□□□ -2.03
SCFD1-205ENST00000469043 IQCJQ1A5X6 159 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 RPS27LQ71UM5 84 aaKnown RBP2.36□□□□□ -2.03
SCFD1-205ENST00000469043 DEFB107AQ8IZN7 70 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 TTTY12Q9BZ98 90 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 MUC6Q6W4X9 2439 aa2.36□□□□□ -2.03
SCFD1-205ENST00000469043 WDR87Q6ZQQ6 2873 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 DNAH14Q0VDD8 3507 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 MUC3AQ02505 3323 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 IGKV1D-17A0A075B6S4 117 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 H3BQ15 152 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 IFI6P09912 130 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 C10orf55Q5SWW7 151 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 SPTSSBQ8NFR3 76 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 LCN9Q8WX39 176 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 TXNDC17Q9BRA2 123 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 PRO1933Q9H354 126 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 LINC00312Q9Y6C7 94 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 DOCK11Q5JSL3 2073 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 VCANP13611 3396 aa2.35□□□□□ -2.03
SCFD1-205ENST00000469043 CEP250Q9BV73 2442 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 MED12Q93074 2177 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 DNAJC13O75165 2243 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 ACACAQ13085 2346 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 TRBV10-3A0A0K0K1G6 114 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 FXYD1O00168 92 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 S100A3P33764 101 aa2.34□□□□□ -2.03
SCFD1-205ENST00000469043 COMMD6Q7Z4G1 85 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms