RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SFT2D2O95562 160 aa0.44□□□□□ -2.34
PRPF40A-205ENST00000467114 HSD52Q0P140 79 aa0.44□□□□□ -2.34
PRPF40A-205ENST00000467114 Q5BKY6 102 aa0.44□□□□□ -2.34
PRPF40A-205ENST00000467114 FAM213BQ8TBF2 198 aa0.44□□□□□ -2.34
PRPF40A-205ENST00000467114 LINC00472Q9H8W2 130 aa0.44□□□□□ -2.34
PRPF40A-205ENST00000467114 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
PRPF40A-205ENST00000467114 POLQO75417 2590 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 S100A3P33764 101 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 SNCAP37840 140 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 Q6JHZ5 121 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 MANBALQ9NQG1 85 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 CDC42SE2Q9NRR3 84 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 F8P00451 2351 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 NRKQ7Z2Y5 1582 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 PEG3Q9GZU2 1588 aa0.43□□□□□ -2.34
PRPF40A-205ENST00000467114 CACNA1CQ13936 2221 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 NAP1L6A6NFF2 107 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 H3BQ15 152 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 BCE1O60756 84 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 SPINK1P00995 79 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 Q0VG73 95 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 FAM167A-AS1Q96KT0 104 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 CGREF1Q99674 301 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 TCEAL7Q9BRU2 100 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 CNFNQ9BYD5 112 aa0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 NXT2Q9NPJ8 142 aaKnown RBP0.42□□□□□ -2.34
PRPF40A-205ENST00000467114 PIEZO1Q92508 2521 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 LRRC37A2A6NM11 1700 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 WNK3Q9BYP7 1800 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 KIF21AQ7Z4S6 1674 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 RIMS1Q86UR5 1692 aaKnown RBP0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 TRAV22A0A0B4J277 110 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 TMEM262E9PQX1 116 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 C14orf144Q96I85 54 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 PRO0255Q9UI72 69 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 SHROOM2Q13796 1616 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 PLXNB2O15031 1838 aa0.41□□□□□ -2.34
PRPF40A-205ENST00000467114 C12orf57Q99622 126 aa0.4□□□□□ -2.35
PRPF40A-205ENST00000467114 FAIMQ9NVQ4 179 aa0.4□□□□□ -2.35
PRPF40A-205ENST00000467114 SPCS1Q9Y6A9 102 aa0.4□□□□□ -2.35
PRPF40A-205ENST00000467114 ARL2-SNX15V9GYD0 113 aa0.4□□□□□ -2.35
PRPF40A-205ENST00000467114 KDM3BQ7LBC6 1761 aa0.4□□□□□ -2.35
PRPF40A-205ENST00000467114 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 TCHHQ07283 1943 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 ATP6V1G2-DDX39BF2Z307 99 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 MGPP08493 103 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 IGLC1P0CG04 106 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 SFTA2Q6UW10 78 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 PRO1854Q9UHT4 67 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 FAM208BQ5VWN6 2430 aa0.39□□□□□ -2.35
PRPF40A-205ENST00000467114 ARHGAP5Q13017 1502 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 LRP6O75581 1613 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 ERCC6L2Q5T890 1561 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 TMEM218A2RU14 115 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 COX6CP09669 75 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 TRAPPC2P0DI81 140 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 TRAPPC2BP0DI82 140 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 KRTDAPP60985 99 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 UBE2D3P61077 147 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 UBE2D2P62837 147 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 FAM223AQ8IWN6 122 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 SBF2Q86WG5 1849 aa0.38□□□□□ -2.35
PRPF40A-205ENST00000467114 MYOM1P52179 1685 aa0.37□□□□□ -2.35
PRPF40A-205ENST00000467114 SHANK2Q9UPX8 1470 aa0.37□□□□□ -2.35
PRPF40A-205ENST00000467114 CRYM-AS1A6NIL9 109 aa0.37□□□□□ -2.35
PRPF40A-205ENST00000467114 M0R3E3 92 aa0.37□□□□□ -2.35
PRPF40A-205ENST00000467114 IGF2RP11717 2491 aa0.37□□□□□ -2.35
PRPF40A-205ENST00000467114 KDM5AP29375 1690 aaKnown RBP0.37□□□□□ -2.35
PRPF40A-205ENST00000467114 PTPRZ1P23471 2315 aaPredicted RBP0.36□□□□□ -2.35
PRPF40A-205ENST00000467114 hADV29S1A0JD25 119 aa0.36□□□□□ -2.35
PRPF40A-205ENST00000467114 RBP2P50120 134 aa0.36□□□□□ -2.35
PRPF40A-205ENST00000467114 SPRR4Q96PI1 79 aa0.36□□□□□ -2.35
PRPF40A-205ENST00000467114 SPHKAPQ2M3C7 1700 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 ZFYVE26Q68DK2 2539 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 AHCTF1Q8WYP5 2266 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 HMGXB3Q12766 1538 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 TRAV30A0A087WSZ9 112 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 UBA52P62987 128 aaKnown RBP0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 SEC11AP67812 179 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 TMEM263Q8WUH6 116 aaKnown RBP0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 TP53AIP1Q9HCN2 124 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 KMT2DO14686 5537 aa0.35□□□□□ -2.35
PRPF40A-205ENST00000467114 ZFYVE16Q7Z3T8 1539 aa0.34□□□□□ -2.35
PRPF40A-205ENST00000467114 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.35
PRPF40A-205ENST00000467114 CFDP00746 253 aaPredicted RBP0.34□□□□□ -2.36
PRPF40A-205ENST00000467114 S100A10P60903 97 aa0.34□□□□□ -2.36
PRPF40A-205ENST00000467114 ARHGEF5Q12774 1597 aa0.34□□□□□ -2.36
PRPF40A-205ENST00000467114 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
PRPF40A-205ENST00000467114 Q8IZM0 81 aa0.34□□□□□ -2.36
PRPF40A-205ENST00000467114 TET3O43151 1660 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 SPTBN2O15020 2390 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 C10orf142B7Z368 130 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 GNGT2O14610 69 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 LAMC1P11047 1609 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 RAPGEF6Q8TEU7 1601 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
PRPF40A-205ENST00000467114 ABCC5O15440 1437 aa0.32□□□□□ -2.36
PRPF40A-205ENST00000467114 CC2D2AQ9P2K1 1620 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms