RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 HIGD2BQ4VC39 106 aa16.54■□□□□ 0.24
U2AF1-206ENST00000464750 FAT3Q8TDW7 4589 aa16.53■□□□□ 0.24
U2AF1-206ENST00000464750 SRSF3P84103 164 aaKnown RBP16.53■□□□□ 0.24
U2AF1-206ENST00000464750 CIRBPQ14011 172 aaKnown RBP16.53■□□□□ 0.24
U2AF1-206ENST00000464750 PEA15Q15121 130 aa16.52■□□□□ 0.24
U2AF1-206ENST00000464750 C7orf77A4D0Y5 90 aa16.51■□□□□ 0.23
U2AF1-206ENST00000464750 CHTF8P0CG12 524 aa16.51■□□□□ 0.23
U2AF1-206ENST00000464750 FOXI1Q12951 378 aa16.51■□□□□ 0.23
U2AF1-206ENST00000464750 XCL1P47992 114 aa16.5■□□□□ 0.23
U2AF1-206ENST00000464750 MRPL52Q86TS9 123 aaKnown RBP16.5■□□□□ 0.23
U2AF1-206ENST00000464750 GVQW2A0A096LPI5 108 aaPredicted RBP16.49■□□□□ 0.23
U2AF1-206ENST00000464750 LINC00959A0A1B0GUT2 108 aa16.49■□□□□ 0.23
U2AF1-206ENST00000464750 NRACQ8N912 160 aa16.49■□□□□ 0.23
U2AF1-206ENST00000464750 KRTAP3-3Q9BYR6 98 aa16.49■□□□□ 0.23
U2AF1-206ENST00000464750 KRTAP3-2Q9BYR7 98 aa16.49■□□□□ 0.23
U2AF1-206ENST00000464750 SMIM27A0A1W2PRY6 76 aa16.48■□□□□ 0.23
U2AF1-206ENST00000464750 VCYO14598 125 aa16.48■□□□□ 0.23
U2AF1-206ENST00000464750 CCL25O15444 150 aa16.48■□□□□ 0.23
U2AF1-206ENST00000464750 PPP1R17O96001 155 aa16.48■□□□□ 0.23
U2AF1-206ENST00000464750 FCER1GP30273 86 aa16.48■□□□□ 0.23
U2AF1-206ENST00000464750 SUMO2P61956 95 aaKnown RBP16.48■□□□□ 0.23
U2AF1-206ENST00000464750 SPACA4Q8TDM5 124 aa16.48■□□□□ 0.23
U2AF1-206ENST00000464750 SMDT1Q9H4I9 107 aa16.47■□□□□ 0.23
U2AF1-206ENST00000464750 CDC42SE2Q9NRR3 84 aa16.47■□□□□ 0.23
U2AF1-206ENST00000464750 CAMPP49913 170 aa16.46■□□□□ 0.23
U2AF1-206ENST00000464750 MRPL51Q4U2R6 128 aaKnown RBP16.46■□□□□ 0.23
U2AF1-206ENST00000464750 FAM104BQ5XKR9 115 aa16.46■□□□□ 0.23
U2AF1-206ENST00000464750 DPH3Q96FX2 82 aa16.46■□□□□ 0.23
U2AF1-206ENST00000464750 A0A087WYN8 130 aa16.45■□□□□ 0.22
U2AF1-206ENST00000464750 PPP1R2P9O14990 202 aa16.44■□□□□ 0.22
U2AF1-206ENST00000464750 COX6A2Q02221 97 aa16.44■□□□□ 0.22
U2AF1-206ENST00000464750 SS18Q15532 418 aa16.44■□□□□ 0.22
U2AF1-206ENST00000464750 ZNF664Q8N3J9 261 aa16.44■□□□□ 0.22
U2AF1-206ENST00000464750 KIR2DL4Q99706 377 aa16.44■□□□□ 0.22
U2AF1-206ENST00000464750 HNRNPA3P51991 378 aaKnown RBP16.43■□□□□ 0.22
U2AF1-206ENST00000464750 IGHV1-58A0A0C4DH39 117 aa16.42■□□□□ 0.22
U2AF1-206ENST00000464750 A0A1B0GW15 77 aa16.42■□□□□ 0.22
U2AF1-206ENST00000464750 OXTP01178 125 aa16.41■□□□□ 0.22
U2AF1-206ENST00000464750 PRSS3P2Q8NHM4 247 aa16.41■□□□□ 0.22
U2AF1-206ENST00000464750 LINC00862A6NCI5 91 aa16.4■□□□□ 0.22
U2AF1-206ENST00000464750 MRPL54Q6P161 138 aaKnown RBP16.4■□□□□ 0.22
U2AF1-206ENST00000464750 CD164L2Q6UWJ8 174 aa16.4■□□□□ 0.22
U2AF1-206ENST00000464750 UBE2D4Q9Y2X8 147 aa16.4■□□□□ 0.22
U2AF1-206ENST00000464750 IGKV2-24A0A0C4DH68 120 aa16.39■□□□□ 0.21
U2AF1-206ENST00000464750 CKS2P33552 79 aa16.39■□□□□ 0.21
U2AF1-206ENST00000464750 SMAGPQ0VAQ4 97 aa16.39■□□□□ 0.21
U2AF1-206ENST00000464750 PLAC8Q9NZF1 115 aa16.39■□□□□ 0.21
U2AF1-206ENST00000464750 CSDC2Q9Y534 153 aaKnown RBP16.39■□□□□ 0.21
U2AF1-206ENST00000464750 HBBP68871 147 aa16.38■□□□□ 0.21
U2AF1-206ENST00000464750 LINC00526Q96FQ7 95 aa16.38■□□□□ 0.21
U2AF1-206ENST00000464750 C20orf78Q9BR46 151 aa16.38■□□□□ 0.21
U2AF1-206ENST00000464750 S100A8P05109 93 aa16.37■□□□□ 0.21
U2AF1-206ENST00000464750 MAJINQ3KP22 176 aa16.37■□□□□ 0.21
U2AF1-206ENST00000464750 RNASE13Q5GAN3 156 aaKnown RBP16.37■□□□□ 0.21
U2AF1-206ENST00000464750 TRBV24-1A0A075B6N3 115 aa16.36■□□□□ 0.21
U2AF1-206ENST00000464750 A0A1B0GXF2 115 aa16.36■□□□□ 0.21
U2AF1-206ENST00000464750 D6R8Y8 96 aa16.35■□□□□ 0.21
U2AF1-206ENST00000464750 F8W036 122 aa16.35■□□□□ 0.21
U2AF1-206ENST00000464750 TNFRSF6BO95407 300 aa16.35■□□□□ 0.21
U2AF1-206ENST00000464750 RPL32P62910 135 aaKnown RBP16.35■□□□□ 0.21
U2AF1-206ENST00000464750 Q6ZUT4 128 aa16.35■□□□□ 0.21
U2AF1-206ENST00000464750 TMEM18Q96B42 140 aa16.35■□□□□ 0.21
U2AF1-206ENST00000464750 CARD19Q96LW7 228 aa16.35■□□□□ 0.21
U2AF1-206ENST00000464750 A0A096LNI7 61 aa16.34■□□□□ 0.21
U2AF1-206ENST00000464750 C1orf196B1AJZ1 125 aa16.34■□□□□ 0.21
U2AF1-206ENST00000464750 ZNF561-AS1K7EIQ3 104 aa16.33■□□□□ 0.2
U2AF1-206ENST00000464750 TIMM21Q9BVV7 248 aa16.33■□□□□ 0.2
U2AF1-206ENST00000464750 SMIM2Q9BVW6 85 aa16.33■□□□□ 0.2
U2AF1-206ENST00000464750 TRAV13-1A0A0B4J241 112 aa16.32■□□□□ 0.2
U2AF1-206ENST00000464750 TCAPO15273 167 aa16.32■□□□□ 0.2
U2AF1-206ENST00000464750 MALP21145 153 aa16.32■□□□□ 0.2
U2AF1-206ENST00000464750 STPG4Q8N801 248 aa16.32■□□□□ 0.2
U2AF1-206ENST00000464750 C7orf33Q8WU49 177 aa16.32■□□□□ 0.2
U2AF1-206ENST00000464750 PKIGQ9Y2B9 76 aa16.32■□□□□ 0.2
U2AF1-206ENST00000464750 COX7A2LO14548 114 aa16.31■□□□□ 0.2
U2AF1-206ENST00000464750 PHOX2AO14813 284 aa16.31■□□□□ 0.2
U2AF1-206ENST00000464750 NPYP01303 97 aa16.31■□□□□ 0.2
U2AF1-206ENST00000464750 RPL39P62891 51 aaKnown RBP16.3■□□□□ 0.2
U2AF1-206ENST00000464750 SYCNQ0VAF6 134 aa16.3■□□□□ 0.2
U2AF1-206ENST00000464750 ATP5L2Q7Z4Y8 100 aa16.29■□□□□ 0.2
U2AF1-206ENST00000464750 PPBPP02775 128 aa16.28■□□□□ 0.2
U2AF1-206ENST00000464750 HMCN2Q8NDA2 5059 aa16.27■□□□□ 0.2
U2AF1-206ENST00000464750 IGLV4-69A0A075B6H9 119 aa16.27■□□□□ 0.2
U2AF1-206ENST00000464750 LINC00474Q9P2X8 69 aa16.27■□□□□ 0.2
U2AF1-206ENST00000464750 Q6ZRU5 148 aa16.25■□□□□ 0.19
U2AF1-206ENST00000464750 C5orf38Q86SI9 138 aa16.25■□□□□ 0.19
U2AF1-206ENST00000464750 ORMDL3Q8N138 153 aa16.25■□□□□ 0.19
U2AF1-206ENST00000464750 SPANXA1Q9NS26 97 aa16.25■□□□□ 0.19
U2AF1-206ENST00000464750 RAB14P61106 215 aa16.23■□□□□ 0.19
U2AF1-206ENST00000464750 PNRC1Q12796 327 aaPredicted RBP16.23■□□□□ 0.19
U2AF1-206ENST00000464750 SERTAD4-AS1Q5TG53 156 aa16.23■□□□□ 0.19
U2AF1-206ENST00000464750 FAM104AQ969W3 186 aa16.23■□□□□ 0.19
U2AF1-206ENST00000464750 TMEM136Q6ZRR5 245 aa16.22■□□□□ 0.19
U2AF1-206ENST00000464750 PRELID3AQ96N28 172 aa16.22■□□□□ 0.19
U2AF1-206ENST00000464750 CAMK2N2Q96S95 79 aa16.22■□□□□ 0.19
U2AF1-206ENST00000464750 APOMO95445 188 aa16.21■□□□□ 0.19
U2AF1-206ENST00000464750 OPRPNQ99935 248 aaPredicted RBP16.21■□□□□ 0.19
U2AF1-206ENST00000464750 LOC107984640A0A0U1RRK4 108 aa16.2■□□□□ 0.18
U2AF1-206ENST00000464750 PRR3P79522 188 aaKnown RBP16.2■□□□□ 0.18
U2AF1-206ENST00000464750 MRPS36P82909 103 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms