RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 PIGYQ3MUY2 71 aa0.11□□□□□ -2.39
GARNL3-213ENST00000464616 Q5VSD8 79 aa0.11□□□□□ -2.39
GARNL3-213ENST00000464616 KIF21AQ7Z4S6 1674 aa0.11□□□□□ -2.39
GARNL3-213ENST00000464616 EIF4G3O43432 1585 aaKnown RBP0.11□□□□□ -2.39
GARNL3-213ENST00000464616 PTPRZ1P23471 2315 aaPredicted RBP0.1□□□□□ -2.39
GARNL3-213ENST00000464616 WDR7Q9Y4E6 1490 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 LRP1Q07954 4544 aaKnown RBP0.1□□□□□ -2.39
GARNL3-213ENST00000464616 IGLC7A0M8Q6 106 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 F6UZH7 168 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 MGPP08493 103 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 GNG4P50150 75 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 C9orf153Q5TBE3 101 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 SVBPQ8N300 66 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 TP53AIP1Q9HCN2 124 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 FAIMQ9NVQ4 179 aa0.1□□□□□ -2.39
GARNL3-213ENST00000464616 LRP6O75581 1613 aa0.09□□□□□ -2.39
GARNL3-213ENST00000464616 MAPKBP1O60336 1514 aa0.09□□□□□ -2.39
GARNL3-213ENST00000464616 PSME4Q14997 1843 aa0.09□□□□□ -2.39
GARNL3-213ENST00000464616 LOC100130705A0A1B0GUX0 176 aa0.09□□□□□ -2.4
GARNL3-213ENST00000464616 H3BQ15 152 aa0.09□□□□□ -2.4
GARNL3-213ENST00000464616 HMGN4O00479 90 aa0.09□□□□□ -2.4
GARNL3-213ENST00000464616 SNAPC5O75971 98 aa0.09□□□□□ -2.4
GARNL3-213ENST00000464616 SFT2D2O95562 160 aa0.09□□□□□ -2.4
GARNL3-213ENST00000464616 Q6JHZ5 121 aa0.09□□□□□ -2.4
GARNL3-213ENST00000464616 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
GARNL3-213ENST00000464616 RIMS1Q86UR5 1692 aaKnown RBP0.08□□□□□ -2.4
GARNL3-213ENST00000464616 BCE1O60756 84 aa0.08□□□□□ -2.4
GARNL3-213ENST00000464616 DEFB109BQ30KR1 87 aa0.08□□□□□ -2.4
GARNL3-213ENST00000464616 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
GARNL3-213ENST00000464616 NXT2Q9NPJ8 142 aaKnown RBP0.08□□□□□ -2.4
GARNL3-213ENST00000464616 OTOGQ6ZRI0 2925 aa0.08□□□□□ -2.4
GARNL3-213ENST00000464616 MYOM2P54296 1465 aa0.08□□□□□ -2.4
GARNL3-213ENST00000464616 OOSP1A8MZH6 123 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 CORTO00230 105 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 PPP3R1P63098 170 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 TMEM263Q8WUH6 116 aaKnown RBP0.07□□□□□ -2.4
GARNL3-213ENST00000464616 FAM167A-AS1Q96KT0 104 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 DPH3P1Q9H4G8 78 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 LINC00472Q9H8W2 130 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 MYOM1P52179 1685 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 QRICH2Q9H0J4 1663 aa0.07□□□□□ -2.4
GARNL3-213ENST00000464616 TRBV6-1A0A0K0K1D8 114 aa0.06□□□□□ -2.4
GARNL3-213ENST00000464616 CHKB-CPT1BH3BT56 60 aa0.06□□□□□ -2.4
GARNL3-213ENST00000464616 COX6CP09669 75 aa0.06□□□□□ -2.4
GARNL3-213ENST00000464616 GNG8Q9UK08 70 aa0.06□□□□□ -2.4
GARNL3-213ENST00000464616 ZNF236Q9UL36 1845 aa0.06□□□□□ -2.4
GARNL3-213ENST00000464616 FAM135AQ9P2D6 1515 aa0.05□□□□□ -2.4
GARNL3-213ENST00000464616 NAP1L6A6NFF2 107 aa0.05□□□□□ -2.4
GARNL3-213ENST00000464616 KRTDAPP60985 99 aa0.05□□□□□ -2.4
GARNL3-213ENST00000464616 GNG11P61952 73 aa0.05□□□□□ -2.4
GARNL3-213ENST00000464616 C2orf88Q9BSF0 95 aa0.05□□□□□ -2.4
GARNL3-213ENST00000464616 CDC42SE2Q9NRR3 84 aa0.05□□□□□ -2.4
GARNL3-213ENST00000464616 A0A1B0GV90 55 aa0.04□□□□□ -2.4
GARNL3-213ENST00000464616 TSLPQ969D9 159 aa0.04□□□□□ -2.4
GARNL3-213ENST00000464616 HRNRQ86YZ3 2850 aaPredicted RBP0.04□□□□□ -2.4
GARNL3-213ENST00000464616 CUL7Q14999 1698 aa0.04□□□□□ -2.4
GARNL3-213ENST00000464616 C10orf71Q711Q0 1435 aa0.04□□□□□ -2.4
GARNL3-213ENST00000464616 NCOR2Q9Y618 2525 aa0.04□□□□□ -2.4
GARNL3-213ENST00000464616 PPRC1Q5VV67 1664 aaKnown RBP0.03□□□□□ -2.4
GARNL3-213ENST00000464616 SPRR1AP35321 89 aa0.03□□□□□ -2.4
GARNL3-213ENST00000464616 ASXL3Q9C0F0 2248 aa0.03□□□□□ -2.4
GARNL3-213ENST00000464616 AHCTF1Q8WYP5 2266 aa0.03□□□□□ -2.4
GARNL3-213ENST00000464616 IGF2RP11717 2491 aa0.03□□□□□ -2.41
GARNL3-213ENST00000464616 NRKQ7Z2Y5 1582 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 ROBO1Q9Y6N7 1651 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 FAM208BQ5VWN6 2430 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 TRAPPC2P0DI81 140 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 TRAPPC2BP0DI82 140 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 COX6B1P14854 86 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 SPRR4Q96PI1 79 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 PRO1933Q9H354 126 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 LINC00474Q9P2X8 69 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 SCAPERQ9BY12 1400 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 POLA1P09884 1462 aaPredicted RBP0.02□□□□□ -2.41
GARNL3-213ENST00000464616 SHROOM2Q13796 1616 aa0.02□□□□□ -2.41
GARNL3-213ENST00000464616 I3L2K1 104 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 IGLC1P0CG04 106 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 S100A1P23297 94 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 UBA52P62987 128 aaKnown RBP0.01□□□□□ -2.41
GARNL3-213ENST00000464616 GTF2H5Q6ZYL4 71 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 C12orf57Q99622 126 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 PRO1854Q9UHT4 67 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 ARL2-SNX15V9GYD0 113 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 PAPPAQ13219 1627 aa0.01□□□□□ -2.41
GARNL3-213ENST00000464616 FXYD6-FXYD2A0A087WZ82 144 aa0□□□□□ -2.41
GARNL3-213ENST00000464616 POLQO75417 2590 aa0□□□□□ -2.41
GARNL3-213ENST00000464616 LAMC1P11047 1609 aa0□□□□□ -2.41
GARNL3-213ENST00000464616 DSTQ03001 7570 aaKnown RBP0□□□□□ -2.41
GARNL3-213ENST00000464616 MANBALQ9NQG1 85 aa0□□□□□ -2.41
GARNL3-213ENST00000464616 DIP2CQ9Y2E4 1556 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 IGSF10Q6WRI0 2623 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 TRBV7-4A0A0J9YYF1 115 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 A0A1B0GWA3 101 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 UBE2D3P61077 147 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 UBE2D2P62837 147 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 DEFB123Q8N688 67 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 DOPEY1Q5JWR5 2465 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 F8P00451 2351 aa-0.01□□□□□ -2.41
GARNL3-213ENST00000464616 HMGXB3Q12766 1538 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms