RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 IGF1P05019 195 aa8.49□□□□□ -1.05
TRAPPC3-205ENST00000462715 POLR2KP53803 58 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-205ENST00000462715 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
TRAPPC3-205ENST00000462715 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
TRAPPC3-205ENST00000462715 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC3-205ENST00000462715 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
TRAPPC3-205ENST00000462715 STAB1Q9NY15 2570 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 ATP6V0E1O15342 81 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 NXPH4O95158 308 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 RHOHQ15669 191 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 APELAP0DMC3 54 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 MALP21145 153 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 NDPQ00604 133 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 Q5XG85 94 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 SMCR5Q8TEV8 140 aa8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
TRAPPC3-205ENST00000462715 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 I3L3M4 83 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 MIAQ16674 131 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 LITAFQ99732 161 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
TRAPPC3-205ENST00000462715 ECSCRQ19T08 205 aa8.46□□□□□ -1.05
TRAPPC3-205ENST00000462715 ANK2Q01484 3957 aa8.46□□□□□ -1.05
TRAPPC3-205ENST00000462715 hADV29S1A0JD25 119 aa8.46□□□□□ -1.06
TRAPPC3-205ENST00000462715 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
TRAPPC3-205ENST00000462715 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.06
TRAPPC3-205ENST00000462715 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.06
TRAPPC3-205ENST00000462715 TRBV7-1A0A0A6YYK4 115 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 TRAV21A0A0B4J279 112 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 NSUN5P1Q3KNT7 163 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 TRAV13-1A0A0B4J241 112 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 TRBV27A0A0K0K1C4 114 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 NDUFC2O95298 119 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 KLK9Q2XQG4 91 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 KLK9Q9UKQ9 250 aa8.45□□□□□ -1.06
TRAPPC3-205ENST00000462715 G3V318 75 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 CFHR3Q02985 330 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 PHLDA3Q9Y5J5 127 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 PLXNB1O43157 2135 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 COX7A2LO14548 114 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 BUB3O43684 328 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 Q6JHZ5 121 aa8.44□□□□□ -1.06
TRAPPC3-205ENST00000462715 PSMB8P28062 276 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 KRTAP10-3P60369 221 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 C19orf54Q5BKX5 351 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 C11orf44Q8N8P7 122 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 KIF25-AS1Q9Y6Z4 181 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 CTSGP08311 255 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 CD28P10747 220 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 RNF182Q8N6D2 247 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 CLEC2BQ92478 149 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 JPT2Q9H910 190 aa8.43□□□□□ -1.06
TRAPPC3-205ENST00000462715 TRAV8-3A0A0A6YYJ7 113 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 EPM2AB3EWF7 344 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 H3BUA1 57 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 MGPP08493 103 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 KHDC1LQ5JSQ8 128 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 C10orf99Q6UWK7 81 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 S100A4P26447 101 aaKnown RBP8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 APRG1Q8IVJ8 170 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 RNF152Q8N8N0 203 aa8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 FAM110DQ8TAY7 271 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC3-205ENST00000462715 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
TRAPPC3-205ENST00000462715 LINC00315P59091 139 aa8.41□□□□□ -1.06
TRAPPC3-205ENST00000462715 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
TRAPPC3-205ENST00000462715 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
TRAPPC3-205ENST00000462715 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.07
TRAPPC3-205ENST00000462715 OXTP01178 125 aa8.4□□□□□ -1.07
TRAPPC3-205ENST00000462715 FAM19A4Q96LR4 140 aa8.4□□□□□ -1.07
TRAPPC3-205ENST00000462715 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 DAZ2Q13117 558 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 DAZ4Q86SG3 579 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 EEF1AKMT3Q96AZ1 226 aa8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 OVOL2Q9BRP0 275 aa8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 DAZ1Q9NQZ3 744 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 DAZ3Q9NR90 486 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 PRSS2P07478 247 aa8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 UBE2E2Q96LR5 201 aa8.39□□□□□ -1.07
TRAPPC3-205ENST00000462715 A0A1W2PRX2 142 aa8.38□□□□□ -1.07
TRAPPC3-205ENST00000462715 USMG5Q96IX5 58 aa8.38□□□□□ -1.07
TRAPPC3-205ENST00000462715 U3KQE9 123 aa8.38□□□□□ -1.07
TRAPPC3-205ENST00000462715 FAM223BA6NKX1 122 aa8.38□□□□□ -1.07
TRAPPC3-205ENST00000462715 BCE1O60756 84 aa8.38□□□□□ -1.07
TRAPPC3-205ENST00000462715 TIRAPP58753 221 aa8.38□□□□□ -1.07
TRAPPC3-205ENST00000462715 FAM223AQ8IWN6 122 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms