RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 IGHV3OR16-10A0A075B7F0 116 aa11.32□□□□□ -0.6
SSR4-206ENST00000460616 LMO4P61968 165 aa11.32□□□□□ -0.6
SSR4-206ENST00000460616 MAPK1IP1LQ8NDC0 245 aa11.32□□□□□ -0.6
SSR4-206ENST00000460616 IGHV3-73A0A0B4J1V6 119 aa11.31□□□□□ -0.6
SSR4-206ENST00000460616 UQCRQO14949 82 aa11.31□□□□□ -0.6
SSR4-206ENST00000460616 AKAP9Q99996 3911 aa11.31□□□□□ -0.6
SSR4-206ENST00000460616 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
SSR4-206ENST00000460616 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
SSR4-206ENST00000460616 DNAJC30Q96LL9 226 aa11.31□□□□□ -0.6
SSR4-206ENST00000460616 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
SSR4-206ENST00000460616 H3BUA1 57 aa11.3□□□□□ -0.6
SSR4-206ENST00000460616 CIRBPQ14011 172 aaKnown RBP11.3□□□□□ -0.6
SSR4-206ENST00000460616 SPINK13Q1W4C9 94 aa11.3□□□□□ -0.6
SSR4-206ENST00000460616 COX7A2LO14548 114 aa11.3□□□□□ -0.6
SSR4-206ENST00000460616 LINC00526Q96FQ7 95 aa11.29□□□□□ -0.6
SSR4-206ENST00000460616 PROK1P58294 105 aa11.29□□□□□ -0.6
SSR4-206ENST00000460616 A0A096LNT2 108 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 K7EMT4 169 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 ATP5G1P05496 136 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 HERVK_113P63121 156 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 DAZ2Q13117 558 aaKnown RBP11.28□□□□□ -0.6
SSR4-206ENST00000460616 DAZ4Q86SG3 579 aaKnown RBP11.28□□□□□ -0.6
SSR4-206ENST00000460616 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 Q96MF0 132 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 DAZ3Q9NR90 486 aaKnown RBP11.28□□□□□ -0.6
SSR4-206ENST00000460616 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 NDUFA1O15239 70 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 LINC00308Q8TCZ7 52 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 MYO9AB2RTY4 2548 aa11.28□□□□□ -0.6
SSR4-206ENST00000460616 IGHG2P01859 326 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
SSR4-206ENST00000460616 LY6EQ16553 131 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.611e-6■■□□□ 14.5
SSR4-206ENST00000460616 BAALC-AS2P0C853 105 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 SDIM1Q6ZPB5 146 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
SSR4-206ENST00000460616 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
SSR4-206ENST00000460616 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
SSR4-206ENST00000460616 LOC107984640A0A0U1RRK4 108 aa11.26□□□□□ -0.61
SSR4-206ENST00000460616 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
SSR4-206ENST00000460616 CHCHD7Q9BUK0 85 aa11.26□□□□□ -0.61
SSR4-206ENST00000460616 CXCL5P42830 114 aa11.26□□□□□ -0.61
SSR4-206ENST00000460616 PEMTQ9UBM1 199 aa11.26□□□□□ -0.61
SSR4-206ENST00000460616 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 HTN1P15515 57 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 DSCR9P59020 149 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 C5orf38Q86SI9 138 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 Q8N2B8 174 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 Q9UF83 564 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 CSDC2Q9Y534 153 aaKnown RBP11.25□□□□□ -0.61
SSR4-206ENST00000460616 A0A0U1RRA0 63 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 BLCAPP62952 87 aa11.25□□□□□ -0.61
SSR4-206ENST00000460616 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
SSR4-206ENST00000460616 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
SSR4-206ENST00000460616 SETXQ7Z333 2677 aaKnown RBP11.24□□□□□ -0.61
SSR4-206ENST00000460616 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
SSR4-206ENST00000460616 TRACP01848 142 aa11.24□□□□□ -0.61
SSR4-206ENST00000460616 COX7CP15954 63 aa11.24□□□□□ -0.61
SSR4-206ENST00000460616 Q9H8V8 135 aa11.24□□□□□ -0.61
SSR4-206ENST00000460616 TIRAPP58753 221 aa11.23□□□□□ -0.61
SSR4-206ENST00000460616 BEAN1Q3B7T3 259 aa11.23□□□□□ -0.61
SSR4-206ENST00000460616 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
SSR4-206ENST00000460616 TEX15Q9BXT5 2789 aa11.22□□□□□ -0.61
SSR4-206ENST00000460616 ACANP16112 2415 aa11.22□□□□□ -0.61
SSR4-206ENST00000460616 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
SSR4-206ENST00000460616 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.22□□□□□ -0.61
SSR4-206ENST00000460616 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
SSR4-206ENST00000460616 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 OTOGQ6ZRI0 2925 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 IGLV5-45A0A087WSX0 123 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 J3KT08 172 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 K7EQG2 157 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 CSPG4Q6UVK1 2322 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 Q6ZSN1 163 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 C22orf24Q9Y442 160 aa11.21□□□□□ -0.61
SSR4-206ENST00000460616 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.62
SSR4-206ENST00000460616 INAFM2P0DMQ5 153 aa11.2□□□□□ -0.62
SSR4-206ENST00000460616 H3BUX3 64 aa11.2□□□□□ -0.62
SSR4-206ENST00000460616 COX6A2Q02221 97 aa11.2□□□□□ -0.62
SSR4-206ENST00000460616 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
SSR4-206ENST00000460616 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 A0A1B0GX51 115 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 C2orf48Q96LS8 159 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 MSMBP08118 114 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 CRYGAP11844 174 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 FAM218AQ96MZ4 157 aa11.19□□□□□ -0.62
SSR4-206ENST00000460616 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
SSR4-206ENST00000460616 RBMY1A1P0DJD3 496 aaKnown RBP11.18□□□□□ -0.62
SSR4-206ENST00000460616 RBMY1CP0DJD4 496 aa11.18□□□□□ -0.62
SSR4-206ENST00000460616 RBMY1FQ15415 496 aaKnown RBP11.18□□□□□ -0.62
SSR4-206ENST00000460616 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
SSR4-206ENST00000460616 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
SSR4-206ENST00000460616 A6NDX4 124 aa11.18□□□□□ -0.62
SSR4-206ENST00000460616 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
SSR4-206ENST00000460616 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
SSR4-206ENST00000460616 ATOX1O00244 68 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms