RNA–Protein interactions for RNA: ENST00000458645.5

LINC01006-207, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 4 BASIC

Gene LINC01006, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-207ENST00000458645 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
LINC01006-207ENST00000458645 URB1-AS1Q96HZ7 61 aa4.43□□□□□ -1.7
LINC01006-207ENST00000458645 TMEM167BQ9NRX6 74 aa4.43□□□□□ -1.7
LINC01006-207ENST00000458645 GIPP09681 153 aaPredicted RBP4.42□□□□□ -1.7
LINC01006-207ENST00000458645 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.42□□□□□ -1.7
LINC01006-207ENST00000458645 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
LINC01006-207ENST00000458645 LINC00474Q9P2X8 69 aa4.42□□□□□ -1.7
LINC01006-207ENST00000458645 IGLV1-50A0A075B6I6 118 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
LINC01006-207ENST00000458645 FAM168BA1KXE4 195 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 IGKV2-29A2NJV5 120 aaPredicted RBP4.41□□□□□ -1.7
LINC01006-207ENST00000458645 XCL1P47992 114 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 SYCNQ0VAF6 134 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 SPANXN1Q5VSR9 72 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 FER1L6-AS1Q8NA97 138 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 CYTL1Q9NRR1 136 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 TNFSF18Q9UNG2 199 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 ZFP30Q9Y2G7 519 aa4.41□□□□□ -1.7
LINC01006-207ENST00000458645 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.4□□□□□ -1.71
LINC01006-207ENST00000458645 CCL25O15444 150 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 ARPC5O15511 151 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 OR5AL1P0C617 328 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 FHITP49789 147 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 MEF2BQ02080 365 aaPredicted RBP4.4□□□□□ -1.71
LINC01006-207ENST00000458645 RGS21Q2M5E4 152 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 HIST1H2BAQ96A08 127 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 FMC1Q96HJ9 113 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 PGLYRP4Q96LB8 373 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 RETNLBQ9BQ08 111 aa4.4□□□□□ -1.71
LINC01006-207ENST00000458645 PSMG3Q9BT73 122 aaPredicted RBP4.4□□□□□ -1.71
LINC01006-207ENST00000458645 ACTR3CQ9C0K3 210 aaPredicted RBP4.4□□□□□ -1.71
LINC01006-207ENST00000458645 IGLV4-69A0A075B6H9 119 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 LOC107984640A0A0U1RRK4 108 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 A0A1B0GV50 99 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 H0Y8G0 127 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 UBE2L6O14933 153 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 CXCL1P09341 107 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 UBE2G1P62253 170 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 NUP35Q8NFH5 326 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 AP1S3Q96PC3 154 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
LINC01006-207ENST00000458645 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
LINC01006-207ENST00000458645 IGHV1-58A0A0C4DH39 117 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 LINC00959A0A1B0GUT2 108 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 SERF2P84101 59 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 RASL11AQ6T310 242 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
LINC01006-207ENST00000458645 A0A087WZ39 114 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 A0A087X002 238 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 BORCS7-ASMTA0A0B4J1R7 106 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 CTXND1A0A1B0GTU2 59 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 MBP02144 154 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 IGLC6P0CF74 106 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 FGF6P10767 208 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 NTF3P20783 257 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 UBE2D1P51668 147 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 RPL18AQ02543 176 aaKnown RBP4.37□□□□□ -1.71
LINC01006-207ENST00000458645 COTL1Q14019 142 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 AKR1C8PQ5T2L2 129 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 RNASEKQ6P5S7 137 aaKnown RBP4.37□□□□□ -1.71
LINC01006-207ENST00000458645 OR5A1Q8NGJ0 315 aa4.37□□□□□ -1.71
LINC01006-207ENST00000458645 MAP1LC3B2A6NCE7 125 aa4.36□□□□□ -1.71
LINC01006-207ENST00000458645 APOMO95445 188 aa4.36□□□□□ -1.71
LINC01006-207ENST00000458645 AKR1C3P42330 323 aa4.36□□□□□ -1.71
LINC01006-207ENST00000458645 EIF5AP63241 154 aaKnown RBP4.36□□□□□ -1.71
LINC01006-207ENST00000458645 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
LINC01006-207ENST00000458645 RPL39LQ96EH5 51 aaKnown RBP4.36□□□□□ -1.71
LINC01006-207ENST00000458645 MAP1LC3BQ9GZQ8 125 aa4.36□□□□□ -1.71
LINC01006-207ENST00000458645 RPP21Q9H633 154 aaKnown RBP4.36□□□□□ -1.71
LINC01006-207ENST00000458645 TRAV1-1A0A0B4J248 108 aa4.35□□□□□ -1.71
LINC01006-207ENST00000458645 CCL20P78556 96 aa4.35□□□□□ -1.71
LINC01006-207ENST00000458645 AMMECR1LQ6DCA0 310 aa4.35□□□□□ -1.71
LINC01006-207ENST00000458645 FAM19A5Q7Z5A7 132 aaPredicted RBP4.35□□□□□ -1.71
LINC01006-207ENST00000458645 KCNRGQ8N5I3 272 aa4.35□□□□□ -1.71
LINC01006-207ENST00000458645 FAM213BQ8TBF2 198 aa4.35□□□□□ -1.71
LINC01006-207ENST00000458645 BCL2L11O43521 198 aa4.34□□□□□ -1.71
LINC01006-207ENST00000458645 RPL13AP40429 203 aaKnown RBP4.34□□□□□ -1.71
LINC01006-207ENST00000458645 FOXA3P55318 350 aaPredicted RBP4.34□□□□□ -1.71
LINC01006-207ENST00000458645 TMUB2Q71RG4 321 aa4.34□□□□□ -1.71
LINC01006-207ENST00000458645 SFT2D1Q8WV19 159 aa4.34□□□□□ -1.71
LINC01006-207ENST00000458645 CAMK2N2Q96S95 79 aa4.34□□□□□ -1.71
LINC01006-207ENST00000458645 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
LINC01006-207ENST00000458645 RNASE13Q5GAN3 156 aaKnown RBP4.33□□□□□ -1.72
LINC01006-207ENST00000458645 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
LINC01006-207ENST00000458645 LYZL1Q6UWQ5 148 aa4.33□□□□□ -1.72
LINC01006-207ENST00000458645 BAGE2Q86Y30 109 aa4.33□□□□□ -1.72
LINC01006-207ENST00000458645 STOML3Q8TAV4 291 aa4.33□□□□□ -1.72
LINC01006-207ENST00000458645 NKX6-2Q9C056 277 aaPredicted RBP4.33□□□□□ -1.72
LINC01006-207ENST00000458645 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
LINC01006-207ENST00000458645 CHTOPQ9Y3Y2 248 aaKnown RBP4.33□□□□□ -1.72
LINC01006-207ENST00000458645 HMSDA8MTL9 139 aa4.32□□□□□ -1.72
LINC01006-207ENST00000458645 APCSP02743 223 aa4.32□□□□□ -1.72
LINC01006-207ENST00000458645 ESDP10768 282 aa4.32□□□□□ -1.72
LINC01006-207ENST00000458645 C5orf38Q86SI9 138 aa4.32□□□□□ -1.72
LINC01006-207ENST00000458645 MBD3L1Q8WWY6 194 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms