RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SULT1A2P50226 295 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 RPS20P60866 119 aaKnown RBP2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 PKIAP61925 76 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 EIF5AP63241 154 aaKnown RBP2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 COX6A2Q02221 97 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 HIGD2BQ4VC39 106 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 C9orf62Q8N4C0 152 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 GATD1Q8NB37 220 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 C11orf52Q96A22 123 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 RPL39LQ96EH5 51 aaKnown RBP2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 RNASE7Q9H1E1 156 aaKnown RBP2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 DPH3P1Q9H4G8 78 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 MANBALQ9NQG1 85 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 IGHV3-64A0A075B6Q5 118 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 IGLV5-45A0A087WSX0 123 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 TRAV8-4A0A0B4J246 113 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 IGKV2-29A2NJV5 120 aaPredicted RBP2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 XKRY2A2RUG3 117 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 K7EN84 100 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 GAS8-AS1O95177 125 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 TRGC1P0CF51 173 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 MT1HL1P0DM35 61 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 MEF2BQ02080 365 aaPredicted RBP2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 COTL1Q14019 142 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 LBHQ53QV2 105 aaPredicted RBP2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 RNASEKQ6P5S7 137 aaKnown RBP2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 LYPD6BQ8NI32 183 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 GTSF1Q8WW33 167 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 LINC00526Q96FQ7 95 aa2.96□□□□□ -1.94
GTF3C3-208ENST00000455546 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 FAM231BA6NCW3 169 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 TEX46H3BTG2 121 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 PHOX2AO14813 284 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 PDE6DO43924 150 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 BCL2P10415 239 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 RPS10P46783 165 aaKnown RBP2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 MAJINQ3KP22 176 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 AMMECR1LQ6DCA0 310 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 Q6ZRU5 148 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 CHCHD10Q8WYQ3 142 aaPredicted RBP2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 PGLYRP4Q96LB8 373 aa2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 RPP21Q9H633 154 aaKnown RBP2.95□□□□□ -1.94
GTF3C3-208ENST00000455546 FAT3Q8TDW7 4589 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 SDHAF1A6NFY7 115 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 GATCO43716 136 aaKnown RBP2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 NDUFS6O75380 124 aaKnown RBP2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 FGF6P10767 208 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 PMCHP20382 165 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 CTRLP40313 264 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 XCL1P47992 114 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 CEBPGP53567 150 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 EIF5AL1Q6IS14 154 aaKnown RBP2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 PET117Q6UWS5 81 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 STPG4Q8N801 248 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 SPACA4Q8TDM5 124 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 SMIM12Q96EX1 92 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 BIN3Q9NQY0 253 aa2.94□□□□□ -1.94
GTF3C3-208ENST00000455546 A0A096LNI7 61 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 LINC00959A0A1B0GUT2 108 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 I3L3M4 83 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 APCSP02743 223 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 ALKAL2Q6UX46 152 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 SLC51BQ86UW2 128 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 CNFNQ9BYD5 112 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 TMEM242Q9NWH2 141 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 PLAC8Q9NZF1 115 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
GTF3C3-208ENST00000455546 A8MWL6 223 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 SMKR1H3BMG3 65 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 H7C423 109 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 CCL25O15444 150 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 NCR2O95944 276 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 TSHBP01222 138 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 ESDP10768 282 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 RAB4AP20338 218 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 LINC01547P58512 204 aaPredicted RBP2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 SMIM15Q7Z3B0 74 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 SMIM29Q86T20 159 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 TCTE3Q8IZS6 198 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 OR5A1Q8NGJ0 315 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 RNF185Q96GF1 192 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 ST20Q9HBF5 79 aa2.92□□□□□ -1.94
GTF3C3-208ENST00000455546 GVQW2A0A096LPI5 108 aaPredicted RBP2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 TRBV6-5A0A0K0K1A5 114 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 IFITM10A6NMD0 228 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 HIGD1CA8MV81 97 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 TAGLN2P37802 199 aaKnown RBP2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 SS18Q15532 418 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 TEX261Q6UWH6 196 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 FAM231DQ6ZW35 169 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 AMN1Q8IY45 258 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms