RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SYCNQ0VAF6 134 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 GAGE2BQ13066 116 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 FAM162BQ5T6X4 162 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 TRIQKQ629K1 86 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
RBM39-220ENST00000455343 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 HIST1H2BAQ96A08 127 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 PRAC1Q96KF2 57 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 CARD19Q96LW7 228 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 TMEM167BQ9NRX6 74 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 HSPB11Q9Y547 144 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 IGHV1-58A0A0C4DH39 117 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.13□□□□□ -2.07
RBM39-220ENST00000455343 PEX7O00628 323 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 LYRM1O43325 122 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 SIX6O95475 246 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 TSPAN13O95857 204 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 CXorf1O96002 111 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 LTAP01374 205 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 IL7P13232 177 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 UBE2D1P51668 147 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 MEF2BQ02080 365 aaPredicted RBP2.13□□□□□ -2.07
RBM39-220ENST00000455343 LRRC37A5PQ49AS3 106 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 NUP35Q8NFH5 326 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 SMIM3Q9BZL3 60 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 NKX6-2Q9C056 277 aaPredicted RBP2.13□□□□□ -2.07
RBM39-220ENST00000455343 NUDT15Q9NV35 164 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 USH2AO75445 5202 aa2.13□□□□□ -2.07
RBM39-220ENST00000455343 IGLV4-69A0A075B6H9 119 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 IGLV7-46A0A075B6I9 117 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 A0A087WZ39 114 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 IGKV3OR2-268A0A0C4DH90 116 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 MUC21A0A140T8X8 626 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 LINC00959A0A1B0GUT2 108 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 FAM74A7A6NL05 159 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 UBE2L6O14933 153 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 PAGE4O60829 102 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 APOMO95445 188 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 MPC2O95563 127 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 BCL2P10415 239 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 ATP6V0CP27449 155 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 CAMPP49913 170 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 NKX2-5P52952 324 aaPredicted RBP2.12□□□□□ -2.07
RBM39-220ENST00000455343 H2BFSP57053 126 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 EIF5AP63241 154 aaKnown RBP2.12□□□□□ -2.07
RBM39-220ENST00000455343 SERF2P84101 59 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 RIGQ13278 110 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 CD164L2Q6UWJ8 174 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 OR5A1Q8NGJ0 315 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 PPP1R1CQ8WVI7 109 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 AP1S3Q96PC3 154 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 PSMG3Q9BT73 122 aaPredicted RBP2.12□□□□□ -2.07
RBM39-220ENST00000455343 NIT2Q9NQR4 276 aa2.12□□□□□ -2.07
RBM39-220ENST00000455343 CCL25O15444 150 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 ZNF861PO60384 105 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 MBP02144 154 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 IGLC6P0CF74 106 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 SMIM17P0DL12 118 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 ESDP10768 282 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 NTF3P20783 257 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 XCL1P47992 114 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 CTAG1AP78358 180 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 COTL1Q14019 142 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 ZNF726P1Q15940 193 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 KRTAP19-2Q3LHN2 52 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 ASB16-AS1Q495Z4 193 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 RASL11AQ6T310 242 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 TSKUQ8WUA8 353 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 ISOC2Q96AB3 205 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 FMC1Q96HJ9 113 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 C2orf48Q96LS8 159 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 TCEAL7Q9BRU2 100 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 TNFSF18Q9UNG2 199 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
RBM39-220ENST00000455343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.1□□□□□ -2.07
RBM39-220ENST00000455343 FAM168BA1KXE4 195 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 IGKV2-29A2NJV5 120 aaPredicted RBP2.1□□□□□ -2.07
RBM39-220ENST00000455343 NOL3O60936 208 aaKnown RBP2.1□□□□□ -2.07
RBM39-220ENST00000455343 NCR2O95944 276 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 TLX1NBP0CAT3 122 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 CRYGAP11844 174 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 ZNF25P17030 456 aaPredicted RBP2.1□□□□□ -2.07
RBM39-220ENST00000455343 FHITP49789 147 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 DEFA3P59666 94 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 UBE2G2P60604 165 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 SSTP61278 116 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 UBE2G1P62253 170 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 CAMK2N2Q96S95 79 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 RETNLBQ9BQ08 111 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 ACTR3CQ9C0K3 210 aaPredicted RBP2.1□□□□□ -2.07
RBM39-220ENST00000455343 CDC42SE2Q9NRR3 84 aa2.1□□□□□ -2.07
RBM39-220ENST00000455343 CTXND1A0A1B0GTU2 59 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 FAM240BA0A1B0GVZ2 78 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 C19orf71A6NCJ1 209 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 G3V3Q6 166 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 BCL2L11O43521 198 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 MGPP08493 103 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 PET100P0DJ07 73 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms