RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 TFF3Q07654 80 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 FXYD3Q14802 87 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 LINC01545Q5VT33 79 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 FAM216BQ8N7L0 139 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 ATP6V0E2Q8NHE4 81 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 OR4C12Q96R67 309 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 CYSTM1Q9H1C7 97 aa1.59□□□□□ -2.15
VPS8-211ENST00000452140 INTS1Q8N201 2190 aaKnown RBP1.59□□□□□ -2.16
VPS8-211ENST00000452140 USF3Q68DE3 2245 aa1.59□□□□□ -2.16
VPS8-211ENST00000452140 ASCC3Q8N3C0 2202 aaKnown RBP1.58□□□□□ -2.16
VPS8-211ENST00000452140 IGKV2D-26A0A0A0MRZ7 120 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 UBE2L5PA0A1B0GUS4 154 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 OOSP1A8MZH6 123 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 B4DSR2 109 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 F8W1H4 67 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 NPFFO15130 113 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 COX6A1P12074 109 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 ESRGQ1W209 222 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 CFAP126Q5VTH2 177 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 ODF3Q96PU9 254 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 TMEM191AQ9H0A3 160 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 NHP2Q9NX24 153 aaKnown RBP1.58□□□□□ -2.16
VPS8-211ENST00000452140 R4GMQ9 66 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 FREM1Q5H8C1 2179 aa1.58□□□□□ -2.16
VPS8-211ENST00000452140 PRRC2BQ5JSZ5 2229 aaKnown RBP1.58□□□□□ -2.16
VPS8-211ENST00000452140 TNRC6BQ9UPQ9 1833 aaKnown RBP1.57□□□□□ -2.16
VPS8-211ENST00000452140 MUC4Q99102 2169 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 IGHV3-64A0A075B6Q5 118 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 SMIM27A0A1W2PRY6 76 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 TCRBV4S1A1TA0A5B7 111 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 RBAKDNA6NC62 111 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 TMEM262E9PQX1 116 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 HBDP02042 147 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 IFITM1P13164 125 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 SSR2P43308 183 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 EFNA4P52798 201 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 SS18Q15532 418 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 C6orf201Q7Z4U5 140 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 SBSPONQ8IVN8 264 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 C15orf53Q8NAA6 179 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 OTOSQ8NHW6 89 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 PPDPFLQ8WWR9 84 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 DIRC1Q969H9 104 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 SLC50A1Q9BRV3 221 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 TTTY12Q9BZ98 90 aa1.57□□□□□ -2.16
VPS8-211ENST00000452140 MUC22E2RYF6 1773 aaPredicted RBP1.57□□□□□ -2.16
VPS8-211ENST00000452140 CUL9Q8IWT3 2517 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 TRBV7-3A0A075B6L6 115 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.56□□□□□ -2.16
VPS8-211ENST00000452140 C3orf85A0A1B0GTC6 90 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 UQCRQO14949 82 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 LEPROTL1O95214 131 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 ASAH2BP0C7U1 165 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 ARL14EPLP0DKL9 152 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 HLA-DRB4P13762 266 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 PI4KAP42356 2102 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 PCBD1P61457 104 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 DEFB103AP81534 67 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 SERF2P84101 59 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 ZNF818PQ6ZRF7 136 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 Q6ZS92 163 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 Q8N814 137 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 CLEC2BQ92478 149 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 PROK2Q9HC23 129 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 PSENENQ9NZ42 101 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 HIGD1BQ9P298 99 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 PSORS1C2Q9UIG4 136 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 TIMM8BQ9Y5J9 83 aaPredicted RBP1.56□□□□□ -2.16
VPS8-211ENST00000452140 SOX21Q9Y651 276 aaPredicted RBP1.56□□□□□ -2.16
VPS8-211ENST00000452140 LY96Q9Y6Y9 160 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 HLA-DRB4X5D2U9 266 aa1.56□□□□□ -2.16
VPS8-211ENST00000452140 LOC107984156A0A0G2JMH3 177 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 hADV29S1A0JD25 119 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 IBA57-AS1B1ANH7 110 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 IGLV1-51P01701 117 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 CRPP02741 224 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 GCHFRP30047 84 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 ZNF137PP52743 207 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 EDDM3BP56851 147 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 BLCAPP62952 87 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 MRPS36P82909 103 aaKnown RBP1.55□□□□□ -2.16
VPS8-211ENST00000452140 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 TMEM155Q4W5P6 130 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 SPINK9Q5DT21 86 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 SPANXN5Q5MJ07 72 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 C9orf153Q5TBE3 101 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 C1orf134Q5TEV5 83 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 SFTA2Q6UW10 78 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 TEN1Q86WV5 123 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 ARL17AQ8IVW1 177 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 LINC00311Q8N616 119 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 DPH3Q96FX2 82 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 DSCR8Q96T75 97 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 TXNDC17Q9BRA2 123 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 DOCK10Q96BY6 2186 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 PDE4DIPQ5VU43 2346 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 BRWD1Q9NSI6 2320 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 COL4A6Q14031 1691 aa1.55□□□□□ -2.16
VPS8-211ENST00000452140 A0A0C4DFX4 3053 aa1.54□□□□□ -2.16
VPS8-211ENST00000452140 TRBV25-1A0A075B6N4 114 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms