RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DEFA6Q01524 100 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 A0A0J9YY99 117 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 C11orf86A6NJI1 115 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 UBE2L6O14933 153 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
USP39-207ENST00000450066 A0A0J9YWU9 116 aa9.94□□□□□ -0.82
USP39-207ENST00000450066 HTN3P15516 51 aa9.94□□□□□ -0.82
USP39-207ENST00000450066 Q6ZUT4 128 aa9.94□□□□□ -0.82
USP39-207ENST00000450066 TCTAP57738 103 aa9.94□□□□□ -0.82
USP39-207ENST00000450066 NMUP48645 174 aa9.93□□□□□ -0.82
USP39-207ENST00000450066 C2orf88Q9BSF0 95 aa9.93□□□□□ -0.82
USP39-207ENST00000450066 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 HNRNPA3P51991 378 aaKnown RBP9.92□□□□□ -0.82
USP39-207ENST00000450066 RNASE13Q5GAN3 156 aaKnown RBP9.92□□□□□ -0.82
USP39-207ENST00000450066 AMMECR1LQ6DCA0 310 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
USP39-207ENST00000450066 MRPL23Q16540 153 aaKnown RBP9.92□□□□□ -0.82
USP39-207ENST00000450066 BOD1L2Q8IYS8 172 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 CHAC1Q9BUX1 264 aa9.92□□□□□ -0.82
USP39-207ENST00000450066 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 DLEU1O43261 78 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 MRPS16Q9Y3D3 137 aaKnown RBP9.91□□□□□ -0.82
USP39-207ENST00000450066 A0A096LPF7 62 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 Q6ZTC4 211 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 C11orf45Q8TAV5 145 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 TP73-AS1Q9UF72 201 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 ICOSQ9Y6W8 199 aa9.91□□□□□ -0.82
USP39-207ENST00000450066 E9PLD3 99 aa9.9□□□□□ -0.82
USP39-207ENST00000450066 H3BNG1 76 aa9.9□□□□□ -0.82
USP39-207ENST00000450066 CTAG1AP78358 180 aa9.9□□□□□ -0.82
USP39-207ENST00000450066 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
USP39-207ENST00000450066 PCP2Q8IVA1 136 aa9.9□□□□□ -0.82
USP39-207ENST00000450066 TINCRA0A1B0GVN0 87 aa9.89□□□□□ -0.83
USP39-207ENST00000450066 UBE2D1P51668 147 aa9.89□□□□□ -0.83
USP39-207ENST00000450066 GAGE6Q13070 117 aa9.89□□□□□ -0.83
USP39-207ENST00000450066 HERVK_113P61574 105 aa9.89□□□□□ -0.83
USP39-207ENST00000450066 DNHD1Q96M86 4753 aa9.88□□□□□ -0.83
USP39-207ENST00000450066 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
USP39-207ENST00000450066 NANOS2P60321 138 aaKnown RBP9.88□□□□□ -0.83
USP39-207ENST00000450066 HUWE1Q7Z6Z7 4374 aaKnown RBP9.88□□□□□ -0.83
USP39-207ENST00000450066 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
USP39-207ENST00000450066 TRAV8-6A0A0B4J262 113 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 SIVA1O15304 175 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 TTTY13Q9BZ97 58 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 A0A1B0GUV1 79 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 M0R143 59 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 TIRAPP58753 221 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 SEC11AP67812 179 aa9.86□□□□□ -0.83
USP39-207ENST00000450066 GEMIN7Q9H840 131 aaKnown RBP9.86□□□□□ -0.83
USP39-207ENST00000450066 IGLV4-60A0A075B6I1 120 aa9.85□□□□□ -0.83
USP39-207ENST00000450066 DEFB131BA0A096LNP1 70 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 TMEM262E9PQX1 116 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 HERVK_113P63121 156 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 KRTAP21-3Q3LHN1 58 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 LELP1Q5T871 98 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
USP39-207ENST00000450066 RBX1P62877 108 aa9.83□□□□□ -0.84
USP39-207ENST00000450066 LINC00469Q8N7U9 141 aa9.83□□□□□ -0.84
USP39-207ENST00000450066 B9D2Q9BPU9 175 aa9.83□□□□□ -0.84
USP39-207ENST00000450066 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
USP39-207ENST00000450066 MPV17L2Q567V2 206 aa9.83□□□□□ -0.84
USP39-207ENST00000450066 EREGO14944 169 aa9.82□□□□□ -0.84
USP39-207ENST00000450066 LEPROTO15243 131 aa9.82□□□□□ -0.84
USP39-207ENST00000450066 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
USP39-207ENST00000450066 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
USP39-207ENST00000450066 H3BRM9 83 aa9.81□□□□□ -0.84
USP39-207ENST00000450066 J3QQQ9 107 aa9.81□□□□□ -0.84
USP39-207ENST00000450066 COX6A2Q02221 97 aa9.81□□□□□ -0.84
USP39-207ENST00000450066 LBHQ53QV2 105 aaPredicted RBP9.81□□□□□ -0.84
USP39-207ENST00000450066 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
USP39-207ENST00000450066 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
USP39-207ENST00000450066 TRAV10A0A0B4J240 114 aa9.81□□□□□ -0.84
USP39-207ENST00000450066 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
USP39-207ENST00000450066 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
USP39-207ENST00000450066 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
USP39-207ENST00000450066 ZNF815PA8K554 130 aa9.79□□□□□ -0.84
USP39-207ENST00000450066 IGHV3-64A0A075B6Q5 118 aa9.79□□□□□ -0.84
USP39-207ENST00000450066 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
USP39-207ENST00000450066 LGALS3P17931 250 aaKnown RBP9.79□□□□□ -0.84
USP39-207ENST00000450066 HINT1P49773 126 aaPredicted RBP9.79□□□□□ -0.84
USP39-207ENST00000450066 BATFQ16520 125 aa9.78□□□□□ -0.84
USP39-207ENST00000450066 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
USP39-207ENST00000450066 MEGF8Q7Z7M0 2845 aa9.78□□□□□ -0.84
USP39-207ENST00000450066 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
USP39-207ENST00000450066 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms