RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 CTRLP40313 264 aa11.02□□□□□ -0.65
CHCHD3-203ENST00000448878 C9orf116Q5BN46 136 aaPredicted RBP11.02□□□□□ -0.65
CHCHD3-203ENST00000448878 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
CHCHD3-203ENST00000448878 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
CHCHD3-203ENST00000448878 RPL18AQ02543 176 aaKnown RBP11.01□□□□□ -0.65
CHCHD3-203ENST00000448878 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
CHCHD3-203ENST00000448878 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
CHCHD3-203ENST00000448878 TEX261Q6UWH6 196 aa11□□□□□ -0.65
CHCHD3-203ENST00000448878 MRAP2Q96G30 205 aa11□□□□□ -0.65
CHCHD3-203ENST00000448878 TEX46H3BTG2 121 aa10.99□□□□□ -0.65
CHCHD3-203ENST00000448878 ZNF345Q14585 488 aa10.99□□□□□ -0.65
CHCHD3-203ENST00000448878 TCTE3Q8IZS6 198 aa10.99□□□□□ -0.65
CHCHD3-203ENST00000448878 RPP21Q9H633 154 aaKnown RBP10.99□□□□□ -0.65
CHCHD3-203ENST00000448878 TRBV20OR9-2A0A075B6H5 130 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 BCL2L11O43521 198 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 PDE6DO43924 150 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 PRR4Q16378 134 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 NUP35Q8NFH5 326 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 DIRC1Q969H9 104 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 CNFNQ9BYD5 112 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 TMEM242Q9NWH2 141 aa10.98□□□□□ -0.65
CHCHD3-203ENST00000448878 COX7A2LO14548 114 aa10.97□□□□□ -0.65
CHCHD3-203ENST00000448878 APOMO95445 188 aa10.97□□□□□ -0.65
CHCHD3-203ENST00000448878 MEF2BQ02080 365 aaPredicted RBP10.97□□□□□ -0.65
CHCHD3-203ENST00000448878 OPRPNQ99935 248 aaPredicted RBP10.97□□□□□ -0.65
CHCHD3-203ENST00000448878 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
CHCHD3-203ENST00000448878 ST20Q9HBF5 79 aa10.96□□□□□ -0.65
CHCHD3-203ENST00000448878 A0A087WZ39 114 aa10.95□□□□□ -0.66
CHCHD3-203ENST00000448878 TSHBP01222 138 aa10.95□□□□□ -0.66
CHCHD3-203ENST00000448878 ESDP10768 282 aa10.95□□□□□ -0.66
CHCHD3-203ENST00000448878 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
CHCHD3-203ENST00000448878 C1orf196B1AJZ1 125 aa10.94□□□□□ -0.66
CHCHD3-203ENST00000448878 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
CHCHD3-203ENST00000448878 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
CHCHD3-203ENST00000448878 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
CHCHD3-203ENST00000448878 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
CHCHD3-203ENST00000448878 MRPL52Q86TS9 123 aaKnown RBP10.93□□□□□ -0.66
CHCHD3-203ENST00000448878 KRTAP9-2Q9BYQ4 174 aa10.93□□□□□ -0.66
CHCHD3-203ENST00000448878 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
CHCHD3-203ENST00000448878 TRBV6-5A0A0K0K1A5 114 aa10.92□□□□□ -0.66
CHCHD3-203ENST00000448878 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
CHCHD3-203ENST00000448878 HMSDA8MTL9 139 aa10.92□□□□□ -0.66
CHCHD3-203ENST00000448878 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
CHCHD3-203ENST00000448878 H0Y9J4 135 aa10.91□□□□□ -0.66
CHCHD3-203ENST00000448878 UBE2D1P51668 147 aa10.91□□□□□ -0.66
CHCHD3-203ENST00000448878 OCC1Q8TAD7 63 aa10.91□□□□□ -0.66
CHCHD3-203ENST00000448878 C2orf48Q96LS8 159 aa10.91□□□□□ -0.66
CHCHD3-203ENST00000448878 K7EN84 100 aa10.9□□□□□ -0.66
CHCHD3-203ENST00000448878 GATCO43716 136 aaKnown RBP10.9□□□□□ -0.66
CHCHD3-203ENST00000448878 FCER1GP30273 86 aa10.9□□□□□ -0.66
CHCHD3-203ENST00000448878 SPAG11BQ08648 103 aa10.9□□□□□ -0.66
CHCHD3-203ENST00000448878 BORCS7Q96B45 105 aa10.9□□□□□ -0.66
CHCHD3-203ENST00000448878 IGLV1-50A0A075B6I6 118 aa10.89□□□□□ -0.67
CHCHD3-203ENST00000448878 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
CHCHD3-203ENST00000448878 TSKUQ8WUA8 353 aa10.89□□□□□ -0.67
CHCHD3-203ENST00000448878 FAM210AQ96ND0 272 aa10.88□□□□□ -0.67
CHCHD3-203ENST00000448878 FAM168BA1KXE4 195 aa10.87□□□□□ -0.67
CHCHD3-203ENST00000448878 A8MWL6 223 aa10.87□□□□□ -0.67
CHCHD3-203ENST00000448878 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
CHCHD3-203ENST00000448878 SMAGPQ0VAQ4 97 aa10.87□□□□□ -0.67
CHCHD3-203ENST00000448878 FAM19A5Q7Z5A7 132 aaPredicted RBP10.87□□□□□ -0.67
CHCHD3-203ENST00000448878 TRBV27A0A0K0K1C4 114 aa10.85□□□□□ -0.67
CHCHD3-203ENST00000448878 RNF151Q2KHN1 245 aa10.85□□□□□ -0.67
CHCHD3-203ENST00000448878 KRTAP11-1Q8IUC1 163 aa10.85□□□□□ -0.67
CHCHD3-203ENST00000448878 IMMP2LQ96T52 175 aa10.85□□□□□ -0.67
CHCHD3-203ENST00000448878 VCYO14598 125 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 UBE2BP63146 152 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 GAGE2EQ4V326 116 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 GAGE2DQ9UEU5 116 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 UBE2D4Q9Y2X8 147 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 MUC2Q02817 5179 aa10.84□□□□□ -0.67
CHCHD3-203ENST00000448878 RAB4AP20338 218 aa10.83□□□□□ -0.68
CHCHD3-203ENST00000448878 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
CHCHD3-203ENST00000448878 SMKR1H3BMG3 65 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 NDUFA1O15239 70 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 Q6ZUT4 128 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 OR10D4PQ8NGN7 298 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 KIR2DL4Q99706 377 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 MRPL35Q9NZE8 188 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-203ENST00000448878 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
CHCHD3-203ENST00000448878 TSPAN13O95857 204 aa10.81□□□□□ -0.68
CHCHD3-203ENST00000448878 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
CHCHD3-203ENST00000448878 TAGLN2P37802 199 aaKnown RBP10.81□□□□□ -0.68
CHCHD3-203ENST00000448878 CEBPGP53567 150 aa10.81□□□□□ -0.68
CHCHD3-203ENST00000448878 TMEM18Q96B42 140 aa10.81□□□□□ -0.68
CHCHD3-203ENST00000448878 TMEM241Q24JQ0 296 aa10.79□□□□□ -0.68
CHCHD3-203ENST00000448878 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
CHCHD3-203ENST00000448878 UNQ6190/PRO20217Q6UXQ8 127 aa10.79□□□□□ -0.68
CHCHD3-203ENST00000448878 FAM231DQ6ZW35 169 aa10.79□□□□□ -0.68
CHCHD3-203ENST00000448878 HIGD1CA8MV81 97 aa10.78□□□□□ -0.68
CHCHD3-203ENST00000448878 M0QXV9 152 aa10.78□□□□□ -0.68
CHCHD3-203ENST00000448878 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
CHCHD3-203ENST00000448878 F8WDY8 70 aa10.77□□□□□ -0.69
CHCHD3-203ENST00000448878 PPP1R17O96001 155 aa10.77□□□□□ -0.69
CHCHD3-203ENST00000448878 CT83Q5H943 113 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms