RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MRPL53Q96EL3 112 aaKnown RBP3□□□□□ -1.93
SDCBP-205ENST00000447267 KCNS1Q96KK3 526 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 PRELID3AQ96N28 172 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 KIR2DL4Q99706 377 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 ATP5SQ99766 215 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 TMEM222Q9H0R3 208 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 NOP10Q9NPE3 64 aaKnown RBP3□□□□□ -1.93
SDCBP-205ENST00000447267 MTFP1Q9UDX5 166 aa3□□□□□ -1.93
SDCBP-205ENST00000447267 TRAV1-2A0A0B4J238 106 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 IGKV1-6A0A0C4DH72 117 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 FAM236AA0A1B0GUQ0 79 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 FAM236BA0A1B0GV22 79 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 A0A1B0GV50 99 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 GRIFINA4D1Z8 144 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 IBA57-AS1B1ANH7 110 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 TMEM262E9PQX1 116 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 ZNF324O75467 553 aaPredicted RBP2.99□□□□□ -1.93
SDCBP-205ENST00000447267 APOMO95445 188 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 PTHLHP12272 177 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 CRISP2P16562 243 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 FCGR2CP31995 323 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 CCL20P78556 96 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 SSBP1Q04837 148 aaKnown RBP2.99□□□□□ -1.93
SDCBP-205ENST00000447267 CD164Q04900 197 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 SRSF9Q13242 221 aaKnown RBP eCLIP2.99□□□□□ -1.93
SDCBP-205ENST00000447267 UNC119Q13432 240 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 ARFRP1Q13795 201 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 KRTAP19-2Q3LHN2 52 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 ETDBQ3ZM63 59 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 Q56UQ5 140 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 C9orf153Q5TBE3 101 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 FAM231DQ6ZW35 169 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 SH2D6Q7Z4S9 175 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 OR10J6PQ8NGY7 276 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 TMEM167AQ8TBQ9 72 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 SCGB1C1Q8TD33 95 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 BORCS7Q96B45 105 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 DPH3Q96FX2 82 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 C9orf85Q96MD7 179 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 NSG2Q9Y328 171 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 OR2W1Q9Y3N9 320 aa2.99□□□□□ -1.93
SDCBP-205ENST00000447267 DAPL1A0PJW8 107 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 M0R2T5 61 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 SLC17A2O00624 439 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 PDCD6O75340 191 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 PITX3O75364 302 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 SNCGO76070 127 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 DUTP33316 252 aaKnown RBP2.98□□□□□ -1.93
SDCBP-205ENST00000447267 PRSS3P35030 304 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 OPRK1P41145 380 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 LEPP41159 167 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 PRR3P79522 188 aaKnown RBP2.98□□□□□ -1.93
SDCBP-205ENST00000447267 Q499Y3 187 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 NMSQ5H8A3 153 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 CYP2G1PQ6ZSU1 146 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 C2orf91Q6ZV80 131 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 NOTCH2NLQ7Z3S9 236 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 BPIFA4PQ86YQ2 179 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 C10orf126Q8N4M7 172 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 CARD19Q96LW7 228 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 TMEM59Q9BXS4 323 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 TAS2R4Q9NYW5 299 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 TP73-AS1Q9UF72 201 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 PRO0461Q9UI25 63 aa2.98□□□□□ -1.93
SDCBP-205ENST00000447267 A0A1B0GWB2 263 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 PMS2P5A8MQ11 134 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 PRSS46E5RG02 174 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 F2Z2F3 143 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 H3BMG7 143 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 CRXO43186 299 aaPredicted RBP2.97□□□□□ -1.93
SDCBP-205ENST00000447267 ARL6IP5O75915 188 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 DUSP14O95147 198 aaKnown RBP2.97□□□□□ -1.93
SDCBP-205ENST00000447267 HTN1P15515 57 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 PSMB3P49720 205 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 UBE2G1P62253 170 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 RPL23P62829 140 aaKnown RBP2.97□□□□□ -1.93
SDCBP-205ENST00000447267 CACNG7P62955 275 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 WT1-ASQ06250 92 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 C3orf22Q8N5N4 141 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 OR10G8Q8NGN5 311 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 PPDPFLQ8WWR9 84 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 LSM10Q969L4 123 aaKnown RBP2.97□□□□□ -1.93
SDCBP-205ENST00000447267 RAB37Q96AX2 223 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 PLEKHB2Q96CS7 222 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 C2orf50Q96LR7 162 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 IGF2BP2-AS1Q96M15 143 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 TMEM191AQ9H0A3 160 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 NAA60Q9H7X0 242 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 PSORS1C2Q9UIG4 136 aa2.97□□□□□ -1.93
SDCBP-205ENST00000447267 TRAV9-1A0A075B6T8 112 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 TRBV6-6A0A0A6YYG2 114 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 A8MTW9 85 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 KRTAP16-1A8MUX0 517 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 J3QQQ9 107 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 DPM2O94777 84 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 CD3DP04234 171 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 SMIM13P0DJ93 91 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 IGHV3-30-3P0DP02 117 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms