RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
MCF2L-218ENST00000442625 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
MCF2L-218ENST00000442625 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
MCF2L-218ENST00000442625 C15orf53Q8NAA6 179 aa10.33□□□□□ -0.76
MCF2L-218ENST00000442625 TRAV8-4A0A0B4J246 113 aa10.33□□□□□ -0.76
MCF2L-218ENST00000442625 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
MCF2L-218ENST00000442625 RHOHQ15669 191 aa10.33□□□□□ -0.76
MCF2L-218ENST00000442625 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
MCF2L-218ENST00000442625 KLK5Q9Y337 293 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-218ENST00000442625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-218ENST00000442625 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-218ENST00000442625 H7C423 109 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 CHCHD5Q9BSY4 110 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 Q6ZSN1 163 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 C3orf22Q8N5N4 141 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 MAPK1IP1LQ8NDC0 245 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 MXRA5Q9NR99 2828 aa10.32□□□□□ -0.76
MCF2L-218ENST00000442625 POLQO75417 2590 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 FLNCQ14315 2725 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-218ENST00000442625 K7EQG2 157 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 DEFB112Q30KQ8 113 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 TRBV10-2A0A0K0K1G8 114 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 H3BMM0 161 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
MCF2L-218ENST00000442625 CFAP46Q8IYW2 2715 aa10.3□□□□□ -0.76
MCF2L-218ENST00000442625 HIST2H2BDQ6DRA6 164 aa10.3□□□□□ -0.76
MCF2L-218ENST00000442625 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-218ENST00000442625 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
MCF2L-218ENST00000442625 UQCRQO14949 82 aa10.28□□□□□ -0.76
MCF2L-218ENST00000442625 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.77
MCF2L-218ENST00000442625 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
MCF2L-218ENST00000442625 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 AKAP9Q99996 3911 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 HOXD3P31249 432 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-218ENST00000442625 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 GAGE2AQ6NT46 116 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 STHQ8IWL8 128 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 LINC00526Q96FQ7 95 aa10.27□□□□□ -0.77
MCF2L-218ENST00000442625 B4DSR2 109 aa10.26□□□□□ -0.77
MCF2L-218ENST00000442625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-218ENST00000442625 DPH3Q96FX2 82 aa10.26□□□□□ -0.77
MCF2L-218ENST00000442625 VSIG2Q96IQ7 327 aa10.26□□□□□ -0.77
MCF2L-218ENST00000442625 FBN2P35556 2912 aa10.26□□□□□ -0.77
MCF2L-218ENST00000442625 USP9XQ93008 2570 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-218ENST00000442625 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
MCF2L-218ENST00000442625 LINC00467Q9BRT7 94 aa10.26□□□□□ -0.77
MCF2L-218ENST00000442625 MIAQ16674 131 aa10.25□□□□□ -0.77
MCF2L-218ENST00000442625 CDKN2A-AS1Q9UH64 79 aa10.25□□□□□ -0.77
MCF2L-218ENST00000442625 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
MCF2L-218ENST00000442625 MYO9AB2RTY4 2548 aa10.25□□□□□ -0.77
MCF2L-218ENST00000442625 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
MCF2L-218ENST00000442625 NIPBLQ6KC79 2804 aaeCLIP10.24□□□□□ -0.77
MCF2L-218ENST00000442625 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
MCF2L-218ENST00000442625 DEFB131AP59861 70 aa10.24□□□□□ -0.77
MCF2L-218ENST00000442625 TMEM61Q8N0U2 210 aa10.24□□□□□ -0.77
MCF2L-218ENST00000442625 CHCHD7Q9BUK0 85 aa10.24□□□□□ -0.77
MCF2L-218ENST00000442625 SLURP1P55000 103 aa10.23□□□□□ -0.77
MCF2L-218ENST00000442625 COX6A2Q02221 97 aa10.23□□□□□ -0.77
MCF2L-218ENST00000442625 UBE2D4Q9Y2X8 147 aa10.23□□□□□ -0.77
MCF2L-218ENST00000442625 PFN2P35080 140 aa10.22□□□□□ -0.77
MCF2L-218ENST00000442625 WNK1Q9H4A3 2382 aa10.22□□□□□ -0.77
MCF2L-218ENST00000442625 OXTP01178 125 aa10.22□□□□□ -0.77
MCF2L-218ENST00000442625 COX6CP09669 75 aa10.22□□□□□ -0.77
MCF2L-218ENST00000442625 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
MCF2L-218ENST00000442625 RBMY1BA6NDE4 496 aaKnown RBP10.21□□□□□ -0.77
MCF2L-218ENST00000442625 RBMY1EA6NEQ0 496 aaKnown RBP10.21□□□□□ -0.77
MCF2L-218ENST00000442625 RBMY1DP0C7P1 496 aaKnown RBP10.21□□□□□ -0.77
MCF2L-218ENST00000442625 CHD6Q8TD26 2715 aa10.21□□□□□ -0.77
MCF2L-218ENST00000442625 LST1O00453 97 aa10.21□□□□□ -0.78
MCF2L-218ENST00000442625 C2orf48Q96LS8 159 aa10.21□□□□□ -0.78
MCF2L-218ENST00000442625 Q8N2B8 174 aa10.2□□□□□ -0.78
MCF2L-218ENST00000442625 DOPEY1Q5JWR5 2465 aa10.19□□□□□ -0.78
MCF2L-218ENST00000442625 SETD2Q9BYW2 2564 aaPredicted RBP10.19□□□□□ -0.78
MCF2L-218ENST00000442625 TMEM258P61165 79 aa10.19□□□□□ -0.78
MCF2L-218ENST00000442625 Q96MF0 132 aa10.18□□□□□ -0.78
MCF2L-218ENST00000442625 Q9H8V8 135 aa10.18□□□□□ -0.78
MCF2L-218ENST00000442625 TLN2Q9Y4G6 2542 aa10.18□□□□□ -0.78
MCF2L-218ENST00000442625 H3BT86 120 aa10.18□□□□□ -0.78
MCF2L-218ENST00000442625 ZNF702PQ9H963 129 aa10.18□□□□□ -0.78
MCF2L-218ENST00000442625 MYO18BQ8IUG5 2567 aa10.18□□□□□ -0.78
MCF2L-218ENST00000442625 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
MCF2L-218ENST00000442625 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
MCF2L-218ENST00000442625 A0A0U1RQV1 116 aa10.17□□□□□ -0.78
MCF2L-218ENST00000442625 LINC01356Q8N9X3 169 aa10.17□□□□□ -0.78
MCF2L-218ENST00000442625 CRYGAP11844 174 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 KHDC1LQ5JSQ8 128 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 UBE2E2Q96LR5 201 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 NF1P21359 2839 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 IGHV3OR16-12A0A075B7B8 117 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 TRACP01848 142 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 DGAT2L7PQ6IED9 249 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 LINC00308Q8TCZ7 52 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 SMCR5Q8TEV8 140 aa10.16□□□□□ -0.78
MCF2L-218ENST00000442625 TEX15Q9BXT5 2789 aa10.15□□□□□ -0.78
MCF2L-218ENST00000442625 TRAV13-1A0A0B4J241 112 aa10.15□□□□□ -0.78
MCF2L-218ENST00000442625 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms