RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 Q6ZUT4 128 aa13.11□□□□□ -0.31
POLR1E-203ENST00000442009 TRBV6-8A0A0A6YYG3 113 aa13.1□□□□□ -0.31
POLR1E-203ENST00000442009 TEX48A0A1B0GUV7 120 aa13.1□□□□□ -0.31
POLR1E-203ENST00000442009 H7C423 109 aa13.1□□□□□ -0.31
POLR1E-203ENST00000442009 TMEM243Q9BU79 118 aa13.1□□□□□ -0.31
POLR1E-203ENST00000442009 E9PLD3 99 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 PAX4O43316 350 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 TRBV25-1A0A075B6N4 114 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 SIVA1O15304 175 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 ATP6V0E2Q8NHE4 81 aa13.09□□□□□ -0.31
POLR1E-203ENST00000442009 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
POLR1E-203ENST00000442009 K7EIL1 84 aa13.08□□□□□ -0.32
POLR1E-203ENST00000442009 C12orf74Q32Q52 190 aa13.08□□□□□ -0.32
POLR1E-203ENST00000442009 LBHQ53QV2 105 aaPredicted RBP13.08□□□□□ -0.32
POLR1E-203ENST00000442009 RNASE13Q5GAN3 156 aaKnown RBP13.08□□□□□ -0.32
POLR1E-203ENST00000442009 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
POLR1E-203ENST00000442009 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
POLR1E-203ENST00000442009 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
POLR1E-203ENST00000442009 MAPKAPK5-AS1Q8N8E1 139 aa13.06□□□□□ -0.32
POLR1E-203ENST00000442009 CDC42SE2Q9NRR3 84 aa13.06□□□□□ -0.32
POLR1E-203ENST00000442009 PRB2P02812 416 aaPredicted RBP13.06□□□□□ -0.32
POLR1E-203ENST00000442009 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
POLR1E-203ENST00000442009 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
POLR1E-203ENST00000442009 C2orf88Q9BSF0 95 aa13.06□□□□□ -0.32
POLR1E-203ENST00000442009 UBE2D1P51668 147 aa13.05□□□□□ -0.32
POLR1E-203ENST00000442009 TINCRA0A1B0GVN0 87 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 A0A0J9YY99 117 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 TMEM223A0PJW6 202 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 F5H768 121 aa13.04□□□□□ -0.32
POLR1E-203ENST00000442009 TRAV8-6A0A0B4J262 113 aa13.03□□□□□ -0.32
POLR1E-203ENST00000442009 ZNF25P17030 456 aaPredicted RBP13.03□□□□□ -0.32
POLR1E-203ENST00000442009 OR5A1Q8NGJ0 315 aa13.03□□□□□ -0.32
POLR1E-203ENST00000442009 HIGD1BQ9P298 99 aa13.03□□□□□ -0.32
POLR1E-203ENST00000442009 UBE2L6O14933 153 aa13.02□□□□□ -0.32
POLR1E-203ENST00000442009 HERVK_113P61574 105 aa13.02□□□□□ -0.32
POLR1E-203ENST00000442009 TIRAPP58753 221 aa13.02□□□□□ -0.33
POLR1E-203ENST00000442009 MPV17L2Q567V2 206 aa13.02□□□□□ -0.33
POLR1E-203ENST00000442009 TM2D3Q9BRN9 247 aa13.02□□□□□ -0.33
POLR1E-203ENST00000442009 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
POLR1E-203ENST00000442009 IGLV5-45A0A087WSX0 123 aa13□□□□□ -0.33
POLR1E-203ENST00000442009 HINT1P49773 126 aaPredicted RBP13□□□□□ -0.33
POLR1E-203ENST00000442009 GAGE6Q13070 117 aa13□□□□□ -0.33
POLR1E-203ENST00000442009 TMEM101Q96IK0 257 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 CHCHD5Q9BSY4 110 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 A0A0J9YWU9 116 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 MYMXA0A1B0GTQ4 84 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 HTN3P15516 51 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 TSPEAR-AS2P59090 65 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
POLR1E-203ENST00000442009 LINC00242Q5T6M2 205 aa12.99□□□□□ -0.33
POLR1E-203ENST00000442009 IGLV4-60A0A075B6I1 120 aa12.98□□□□□ -0.33
POLR1E-203ENST00000442009 A0A096LPF7 62 aa12.98□□□□□ -0.33
POLR1E-203ENST00000442009 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
POLR1E-203ENST00000442009 SPATA25Q9BR10 227 aa12.98□□□□□ -0.33
POLR1E-203ENST00000442009 H3BNG1 76 aa12.97□□□□□ -0.33
POLR1E-203ENST00000442009 A0A1B0GUV1 79 aa12.97□□□□□ -0.33
POLR1E-203ENST00000442009 LEPROTO15243 131 aa12.97□□□□□ -0.33
POLR1E-203ENST00000442009 COX6A2Q02221 97 aa12.97□□□□□ -0.33
POLR1E-203ENST00000442009 BATFQ16520 125 aa12.97□□□□□ -0.33
POLR1E-203ENST00000442009 SH2D6Q7Z4S9 175 aa12.97□□□□□ -0.33
POLR1E-203ENST00000442009 Q6ZTC4 211 aa12.96□□□□□ -0.33
POLR1E-203ENST00000442009 ICOSQ9Y6W8 199 aa12.96□□□□□ -0.33
POLR1E-203ENST00000442009 J3QQQ9 107 aa12.95□□□□□ -0.34
POLR1E-203ENST00000442009 SEC11AP67812 179 aa12.95□□□□□ -0.34
POLR1E-203ENST00000442009 HSD52Q0P140 79 aa12.95□□□□□ -0.34
POLR1E-203ENST00000442009 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
POLR1E-203ENST00000442009 GEMIN7Q9H840 131 aaKnown RBP12.95□□□□□ -0.34
POLR1E-203ENST00000442009 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
POLR1E-203ENST00000442009 HERVK_113P63121 156 aa12.95□□□□□ -0.34
POLR1E-203ENST00000442009 ZNF815PA8K554 130 aa12.94□□□□□ -0.34
POLR1E-203ENST00000442009 COL5A1-AS1Q5SY13 56 aa12.94□□□□□ -0.34
POLR1E-203ENST00000442009 HUWE1Q7Z6Z7 4374 aaKnown RBP12.93□□□□□ -0.34
POLR1E-203ENST00000442009 TRAV13-1A0A0B4J241 112 aa12.93□□□□□ -0.34
POLR1E-203ENST00000442009 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
POLR1E-203ENST00000442009 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
POLR1E-203ENST00000442009 IGHV1-58A0A0C4DH39 117 aa12.92□□□□□ -0.34
POLR1E-203ENST00000442009 IGHV3-30-3P0DP02 117 aa12.92□□□□□ -0.34
POLR1E-203ENST00000442009 RBX1P62877 108 aa12.92□□□□□ -0.34
POLR1E-203ENST00000442009 C11orf45Q8TAV5 145 aa12.92□□□□□ -0.34
POLR1E-203ENST00000442009 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
POLR1E-203ENST00000442009 NANOS2P60321 138 aaKnown RBP12.91□□□□□ -0.34
POLR1E-203ENST00000442009 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
POLR1E-203ENST00000442009 LELP1Q5T871 98 aa12.9□□□□□ -0.34
POLR1E-203ENST00000442009 LURAP1LQ8IV03 231 aa12.9□□□□□ -0.34
POLR1E-203ENST00000442009 COL7A1Q02388 2944 aa12.9□□□□□ -0.34
POLR1E-203ENST00000442009 IGHV3-64A0A075B6Q5 118 aa12.9□□□□□ -0.34
POLR1E-203ENST00000442009 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
POLR1E-203ENST00000442009 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
POLR1E-203ENST00000442009 TAL2Q16559 108 aa12.9□□□□□ -0.34
POLR1E-203ENST00000442009 TMEM262E9PQX1 116 aa12.89□□□□□ -0.35
POLR1E-203ENST00000442009 H3BRM9 83 aa12.89□□□□□ -0.35
POLR1E-203ENST00000442009 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
POLR1E-203ENST00000442009 LYPD5Q6UWN5 251 aa12.89□□□□□ -0.35
POLR1E-203ENST00000442009 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
POLR1E-203ENST00000442009 A0A1B0GV90 55 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms