RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CLPSL2Q6UWE3 100 aa11.97□□□□□ -0.49
SMPD4-210ENST00000441135 SMIM2Q9BVW6 85 aa11.97□□□□□ -0.49
SMPD4-210ENST00000441135 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
SMPD4-210ENST00000441135 TMEM136Q6ZRR5 245 aa11.96□□□□□ -0.49
SMPD4-210ENST00000441135 NPYP01303 97 aa11.95□□□□□ -0.5
SMPD4-210ENST00000441135 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
SMPD4-210ENST00000441135 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
SMPD4-210ENST00000441135 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
SMPD4-210ENST00000441135 S100PP25815 95 aa11.94□□□□□ -0.5
SMPD4-210ENST00000441135 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
SMPD4-210ENST00000441135 TMEM18Q96B42 140 aa11.94□□□□□ -0.5
SMPD4-210ENST00000441135 PRELID3AQ96N28 172 aa11.94□□□□□ -0.5
SMPD4-210ENST00000441135 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-210ENST00000441135 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
SMPD4-210ENST00000441135 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
SMPD4-210ENST00000441135 FAT1Q14517 4588 aa11.92□□□□□ -0.5
SMPD4-210ENST00000441135 FAM229AH3BQW9 127 aa11.92□□□□□ -0.5
SMPD4-210ENST00000441135 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
SMPD4-210ENST00000441135 HAMPP81172 84 aa11.92□□□□□ -0.5
SMPD4-210ENST00000441135 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
SMPD4-210ENST00000441135 SMR3BP02814 79 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-210ENST00000441135 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
SMPD4-210ENST00000441135 COX19Q49B96 90 aa11.91□□□□□ -0.5
SMPD4-210ENST00000441135 Q6ZSA8 131 aa11.91□□□□□ -0.5
SMPD4-210ENST00000441135 CDC42SE2Q9NRR3 84 aa11.91□□□□□ -0.5
SMPD4-210ENST00000441135 FAM30AQ9NZY2 134 aa11.91□□□□□ -0.5
SMPD4-210ENST00000441135 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
SMPD4-210ENST00000441135 NDUFA5Q16718 116 aa11.9□□□□□ -0.5
SMPD4-210ENST00000441135 UBE2D4Q9Y2X8 147 aa11.9□□□□□ -0.5
SMPD4-210ENST00000441135 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
SMPD4-210ENST00000441135 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
SMPD4-210ENST00000441135 MAP1LC3AQ9H492 121 aa11.89□□□□□ -0.51
SMPD4-210ENST00000441135 SVBPQ8N300 66 aa11.88□□□□□ -0.51
SMPD4-210ENST00000441135 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
SMPD4-210ENST00000441135 RPS10P5Q9NQ39 176 aa11.88□□□□□ -0.51
SMPD4-210ENST00000441135 K7EMI3 77 aa11.87□□□□□ -0.51
SMPD4-210ENST00000441135 CCL25O15444 150 aa11.87□□□□□ -0.51
SMPD4-210ENST00000441135 SNAPINO95295 136 aa11.87□□□□□ -0.51
SMPD4-210ENST00000441135 RAB5AP20339 215 aa11.87□□□□□ -0.51
SMPD4-210ENST00000441135 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-210ENST00000441135 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
SMPD4-210ENST00000441135 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
SMPD4-210ENST00000441135 MT-ND6P03923 174 aa11.86□□□□□ -0.51
SMPD4-210ENST00000441135 Q8N8P6 123 aa11.86□□□□□ -0.51
SMPD4-210ENST00000441135 IGKV3OR2-268A0A0C4DH90 116 aa11.85□□□□□ -0.51
SMPD4-210ENST00000441135 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
SMPD4-210ENST00000441135 APOC3P02656 99 aa11.85□□□□□ -0.51
SMPD4-210ENST00000441135 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
SMPD4-210ENST00000441135 PRSS1P07477 247 aa11.84□□□□□ -0.51
SMPD4-210ENST00000441135 MRPS36P82909 103 aaKnown RBP11.84□□□□□ -0.51
SMPD4-210ENST00000441135 SS18Q15532 418 aa11.84□□□□□ -0.51
SMPD4-210ENST00000441135 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
SMPD4-210ENST00000441135 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
SMPD4-210ENST00000441135 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
SMPD4-210ENST00000441135 FOXI1Q12951 378 aa11.83□□□□□ -0.52
SMPD4-210ENST00000441135 PYGO1Q9Y3Y4 419 aa11.83□□□□□ -0.52
SMPD4-210ENST00000441135 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
SMPD4-210ENST00000441135 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
SMPD4-210ENST00000441135 DNAH8Q96JB1 4490 aa11.82□□□□□ -0.52
SMPD4-210ENST00000441135 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
SMPD4-210ENST00000441135 C1orf196B1AJZ1 125 aa11.81□□□□□ -0.52
SMPD4-210ENST00000441135 PLA2G1BP04054 148 aaKnown RBP11.81□□□□□ -0.52
SMPD4-210ENST00000441135 ORMDL2Q53FV1 153 aa11.81□□□□□ -0.52
SMPD4-210ENST00000441135 CD164L2Q6UWJ8 174 aa11.81□□□□□ -0.52
SMPD4-210ENST00000441135 Q6ZUT4 128 aa11.81□□□□□ -0.52
SMPD4-210ENST00000441135 SCXQ7RTU7 201 aa11.8□□□□□ -0.52
SMPD4-210ENST00000441135 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
SMPD4-210ENST00000441135 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
SMPD4-210ENST00000441135 CHAC1Q9BUX1 264 aa11.8□□□□□ -0.52
SMPD4-210ENST00000441135 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-210ENST00000441135 hDV102S1A0JD36 115 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 NPSP0C0P6 89 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 G0S2P27469 103 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-210ENST00000441135 XCL1P47992 114 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 FAM104AQ969W3 186 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
SMPD4-210ENST00000441135 GVQW2A0A096LPI5 108 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-210ENST00000441135 KIAA1644Q3SXP7 199 aa11.78□□□□□ -0.52
SMPD4-210ENST00000441135 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-210ENST00000441135 IGHV1-58A0A0C4DH39 117 aa11.77□□□□□ -0.53
SMPD4-210ENST00000441135 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.53
SMPD4-210ENST00000441135 VPS13BQ7Z7G8 4022 aa11.77□□□□□ -0.53
SMPD4-210ENST00000441135 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-210ENST00000441135 RNASE13Q5GAN3 156 aaKnown RBP11.76□□□□□ -0.53
SMPD4-210ENST00000441135 C2orf66Q6UXQ4 117 aa11.76□□□□□ -0.53
SMPD4-210ENST00000441135 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
SMPD4-210ENST00000441135 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
SMPD4-210ENST00000441135 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
SMPD4-210ENST00000441135 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
SMPD4-210ENST00000441135 FLG2Q5D862 2391 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-210ENST00000441135 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
SMPD4-210ENST00000441135 TGIF2-C20orf24A0A0A6YYL0 155 aa11.74□□□□□ -0.53
SMPD4-210ENST00000441135 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
SMPD4-210ENST00000441135 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
SMPD4-210ENST00000441135 IFITM10A6NMD0 228 aa11.73□□□□□ -0.53
SMPD4-210ENST00000441135 COX7A2LO14548 114 aa11.73□□□□□ -0.53
SMPD4-210ENST00000441135 YPEL4Q96NS1 127 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms