RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 BAGE2Q86Y30 109 aa5.57□□□□□ -1.52
SMPD4-208ENST00000439029 GATD1Q8NB37 220 aa5.57□□□□□ -1.52
SMPD4-208ENST00000439029 NKX6-2Q9C056 277 aaPredicted RBP5.57□□□□□ -1.52
SMPD4-208ENST00000439029 CTDSP1Q9GZU7 261 aa5.57□□□□□ -1.52
SMPD4-208ENST00000439029 TNFSF18Q9UNG2 199 aa5.57□□□□□ -1.52
SMPD4-208ENST00000439029 CTXND1A0A1B0GTU2 59 aa5.56□□□□□ -1.52
SMPD4-208ENST00000439029 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
SMPD4-208ENST00000439029 PET100P0DJ07 73 aa5.56□□□□□ -1.52
SMPD4-208ENST00000439029 ESDP10768 282 aa5.56□□□□□ -1.52
SMPD4-208ENST00000439029 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
SMPD4-208ENST00000439029 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
SMPD4-208ENST00000439029 IMMP2LQ96T52 175 aa5.56□□□□□ -1.52
SMPD4-208ENST00000439029 CDC42SE2Q9NRR3 84 aa5.56□□□□□ -1.52
SMPD4-208ENST00000439029 NCR2O95944 276 aa5.55□□□□□ -1.52
SMPD4-208ENST00000439029 CFC1BP0CG36 223 aa5.55□□□□□ -1.52
SMPD4-208ENST00000439029 SERF2P84101 59 aa5.55□□□□□ -1.52
SMPD4-208ENST00000439029 UNQ6190/PRO20217Q6UXQ8 127 aa5.55□□□□□ -1.52
SMPD4-208ENST00000439029 C6orf48Q9UBA6 75 aa5.55□□□□□ -1.52
SMPD4-208ENST00000439029 TRAV13-1A0A0B4J241 112 aa5.54□□□□□ -1.52
SMPD4-208ENST00000439029 SCO2A0A1W2PP80 73 aa5.54□□□□□ -1.52
SMPD4-208ENST00000439029 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
SMPD4-208ENST00000439029 LINC00242Q5T6M2 205 aa5.54□□□□□ -1.52
SMPD4-208ENST00000439029 MZT2BQ6NZ67 158 aa5.54□□□□□ -1.52
SMPD4-208ENST00000439029 MRPL35Q9NZE8 188 aaKnown RBP5.54□□□□□ -1.52
SMPD4-208ENST00000439029 ALG5Q9Y673 324 aa5.54□□□□□ -1.52
SMPD4-208ENST00000439029 SDHAF1A6NFY7 115 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 G3V3Q6 166 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 PAGE4O60829 102 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 PMCHP20382 165 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 SEC61BP60468 96 aaKnown RBP5.53□□□□□ -1.52
SMPD4-208ENST00000439029 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 KRTAP13-3Q3SY46 172 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 C9orf129Q5T035 196 aaKnown RBP5.53□□□□□ -1.52
SMPD4-208ENST00000439029 LYZL1Q6UWQ5 148 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 ORAOV1Q8WV07 137 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 SMDT1Q9H4I9 107 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 TMEM242Q9NWH2 141 aa5.53□□□□□ -1.52
SMPD4-208ENST00000439029 MAP1LC3B2A6NCE7 125 aa5.52□□□□□ -1.53
SMPD4-208ENST00000439029 C1orf196B1AJZ1 125 aa5.52□□□□□ -1.53
SMPD4-208ENST00000439029 NDUFA1O15239 70 aa5.52□□□□□ -1.53
SMPD4-208ENST00000439029 SSNA1O43805 119 aa5.52□□□□□ -1.53
SMPD4-208ENST00000439029 SMCPP49901 116 aaPredicted RBP5.52□□□□□ -1.53
SMPD4-208ENST00000439029 FOXA3P55318 350 aaPredicted RBP5.52□□□□□ -1.53
SMPD4-208ENST00000439029 MRAP2Q96G30 205 aa5.52□□□□□ -1.53
SMPD4-208ENST00000439029 MAP1LC3BQ9GZQ8 125 aa5.52□□□□□ -1.53
SMPD4-208ENST00000439029 A0A1B0GV50 99 aa5.51□□□□□ -1.53
SMPD4-208ENST00000439029 I3L3M4 83 aa5.51□□□□□ -1.53
SMPD4-208ENST00000439029 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
SMPD4-208ENST00000439029 RPL28P46779 137 aaKnown RBP5.51□□□□□ -1.53
SMPD4-208ENST00000439029 TWIST1Q15672 202 aa5.51□□□□□ -1.53
SMPD4-208ENST00000439029 CCDC32Q9BV29 185 aa5.51□□□□□ -1.53
SMPD4-208ENST00000439029 RNASE7Q9H1E1 156 aaKnown RBP5.51□□□□□ -1.53
SMPD4-208ENST00000439029 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
SMPD4-208ENST00000439029 NUPR1O60356 82 aa5.5□□□□□ -1.53
SMPD4-208ENST00000439029 S100A9P06702 114 aaKnown RBP5.5□□□□□ -1.53
SMPD4-208ENST00000439029 FHITP49789 147 aa5.5□□□□□ -1.53
SMPD4-208ENST00000439029 RPL7L1Q6DKI1 246 aaKnown RBP5.5□□□□□ -1.53
SMPD4-208ENST00000439029 TCEAL7Q9BRU2 100 aa5.5□□□□□ -1.53
SMPD4-208ENST00000439029 IGKV2D-26A0A0A0MRZ7 120 aa5.49□□□□□ -1.53
SMPD4-208ENST00000439029 RPS20P60866 119 aaKnown RBP5.49□□□□□ -1.53
SMPD4-208ENST00000439029 AKR1C8PQ5T2L2 129 aa5.49□□□□□ -1.53
SMPD4-208ENST00000439029 OR10D4PQ8NGN7 298 aa5.49□□□□□ -1.53
SMPD4-208ENST00000439029 ENKURQ8TC29 256 aa5.49□□□□□ -1.53
SMPD4-208ENST00000439029 C22orf24Q9Y442 160 aa5.49□□□□□ -1.53
SMPD4-208ENST00000439029 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
SMPD4-208ENST00000439029 F2Z2F3 143 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 M0R2T5 61 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 BCE1O60756 84 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 IFNA1P01562 189 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 CTRLP40313 264 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 TMEM241Q24JQ0 296 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 TMUB2Q71RG4 321 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
SMPD4-208ENST00000439029 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
SMPD4-208ENST00000439029 RPL35P42766 123 aaKnown RBP5.47□□□□□ -1.53
SMPD4-208ENST00000439029 Q6ZUT4 128 aa5.47□□□□□ -1.53
SMPD4-208ENST00000439029 C7orf77A4D0Y5 90 aa5.46□□□□□ -1.54
SMPD4-208ENST00000439029 C2orf82Q6UX34 121 aa5.46□□□□□ -1.54
SMPD4-208ENST00000439029 FP248Q71RG6 208 aaPredicted RBP5.46□□□□□ -1.54
SMPD4-208ENST00000439029 C3orf22Q8N5N4 141 aa5.46□□□□□ -1.54
SMPD4-208ENST00000439029 A6NJY4 79 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 RPL37AP8A6NKH3 93 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 PFDN1O60925 122 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 LBHQ53QV2 105 aaPredicted RBP5.45□□□□□ -1.54
SMPD4-208ENST00000439029 CENPWQ5EE01 88 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 MARVELD1Q9BSK0 173 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 ST20Q9HBF5 79 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 XAGE1AQ9HD64 81 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 UBE2D4Q9Y2X8 147 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 USH2AO75445 5202 aa5.45□□□□□ -1.54
SMPD4-208ENST00000439029 BORCS7-ASMTA0A0B4J1R7 106 aa5.44□□□□□ -1.54
SMPD4-208ENST00000439029 XKRY2A2RUG3 117 aa5.44□□□□□ -1.54
SMPD4-208ENST00000439029 RAB19A4D1S5 217 aa5.44□□□□□ -1.54
SMPD4-208ENST00000439029 F8WDY8 70 aa5.44□□□□□ -1.54
SMPD4-208ENST00000439029 Q5BKY6 102 aa5.44□□□□□ -1.54
SMPD4-208ENST00000439029 C9orf62Q8N4C0 152 aa5.44□□□□□ -1.54
SMPD4-208ENST00000439029 TRBV6-5A0A0K0K1A5 114 aa5.43□□□□□ -1.54
SMPD4-208ENST00000439029 GAGE10A6NGK3 116 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms