RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 C1orf194Q5T5A4 169 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 CLPSL2Q6UWE3 100 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 PHF5AQ7RTV0 110 aaKnown RBP1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 ZNF625Q96I27 306 aaPredicted RBP1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 CMSS1Q9BQ75 279 aaKnown RBP1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 MIEN1Q9BRT3 115 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 MIXL1Q9H2W2 232 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 NDUFB11Q9NX14 153 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 FKBP11Q9NYL4 201 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 AK3Q9UIJ7 227 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 PRNDQ9UKY0 176 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 SSR3Q9UNL2 185 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 TMEM56-RWDD3S4R434 201 aa1.18□□□□□ -2.22
HMGB3P12-201ENST00000438745 IGKV2D-26A0A0A0MRZ7 120 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 TRBV6-7A0A0A0MS04 114 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 C7orf71A4D174 169 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 GRIFINA4D1Z8 144 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 J3QLW9 94 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 SLC17A3O00476 420 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 GNRH2O43555 120 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 IGLC1P0CG04 106 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 UBE2D3P61077 147 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 UBE2BP63146 152 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 CTAG1AP78358 180 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 QRFPP83859 136 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 ENHOQ6UWT2 76 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 SPATA24Q86W54 205 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 OR5AK2Q8NH90 309 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 ARHGAP5-AS1Q96IT6 56 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 TSC22D3Q99576 134 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 NIPSNAP1Q9BPW8 284 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 GNB1LQ9BYB4 327 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 ENY2Q9NPA8 101 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 GID8Q9NWU2 228 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 MRPL36Q9P0J6 103 aaKnown RBP1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 CKLFQ9UBR5 152 aa1.17□□□□□ -2.22
HMGB3P12-201ENST00000438745 TMEM212A6NML5 194 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 G3V2T6 193 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 M0R381 172 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 SHBGP04278 402 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 NFYAP23511 347 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 S100A7P31151 101 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 RAB5CP51148 216 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 ARPC4P59998 168 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 UBE2G2P60604 165 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 GNG11P61952 73 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 C9orf116Q5BN46 136 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 AADACL3Q5VUY0 350 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 HACD4Q5VWC8 232 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 GID4Q8IVV7 300 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 OR2D3Q8NGH3 330 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 ZNF431Q8TF32 576 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 MAFIPQ8WZ33 124 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 Q9BRP9 147 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 PDCD10Q9BUL8 212 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 TP73-AS1Q9UF72 201 aa1.16□□□□□ -2.22
HMGB3P12-201ENST00000438745 FLGP20930 4061 aaPredicted RBP1.15□□□□□ -2.22
HMGB3P12-201ENST00000438745 TINCRA0A1B0GVN0 87 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 TRBV6-4A0A1B0GX49 114 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 FXYD1O00168 92 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 FAM107AO95990 144 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 SLC25A5P05141 298 aaKnown RBP1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 FABP1P07148 127 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 SLC25A4P12235 298 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 RNASE4P34096 147 aaKnown RBP1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 G6PCP35575 357 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 XCL1P47992 114 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 SPAG11AQ6PDA7 123 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 ARPINQ7Z6K5 226 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 LHFPL1Q86WI0 220 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 RAB2BQ8WUD1 216 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 TMEM109Q9BVC6 243 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 TIMM21Q9BVV7 248 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 NKX6-2Q9C056 277 aaPredicted RBP1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 SLC39A9Q9NUM3 307 aa1.15□□□□□ -2.23
HMGB3P12-201ENST00000438745 LOC107984640A0A0U1RRK4 108 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 BBIP1A8MTZ0 92 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 SNRPGP15A8MWD9 76 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 M0R129 80 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 M0R2P5 195 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 HPGDSO60760 199 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 GPX1P07203 203 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 UBBP0CG47 229 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 MGST1P10620 155 aaKnown RBP1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 FGF6P10767 208 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 COX4I1P13073 169 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 RPL5P46777 297 aaKnown RBP1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 TAS2R30P59541 319 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 HSPE1P61604 102 aaKnown RBP1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 PKIAP61925 76 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 SAPCD1Q5SSQ6 148 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 LINC00269Q8N2A0 174 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 FAM19A2Q8N3H0 131 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 CARD19Q96LW7 228 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 ZNF471Q9BX82 626 aaPredicted RBP1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 TTTY13Q9BZ97 58 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 UQCC1Q9NVA1 299 aa1.14□□□□□ -2.23
HMGB3P12-201ENST00000438745 CMTM6Q9NX76 183 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms