RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 FOXA3P55318 350 aaPredicted RBP6.59□□□□□ -1.35
HOXD3-203ENST00000432796 ADIRFQ15847 76 aa6.59□□□□□ -1.35
HOXD3-203ENST00000432796 TMEM241Q24JQ0 296 aa6.59□□□□□ -1.35
HOXD3-203ENST00000432796 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
HOXD3-203ENST00000432796 CHCHD10Q8WYQ3 142 aaPredicted RBP6.59□□□□□ -1.35
HOXD3-203ENST00000432796 RNF185Q96GF1 192 aa6.59□□□□□ -1.35
HOXD3-203ENST00000432796 NAT8BQ9UHF3 227 aa6.59□□□□□ -1.35
HOXD3-203ENST00000432796 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
HOXD3-203ENST00000432796 RPS10P46783 165 aaKnown RBP6.58□□□□□ -1.36
HOXD3-203ENST00000432796 ODF1Q14990 250 aa6.58□□□□□ -1.36
HOXD3-203ENST00000432796 TMEM242Q9NWH2 141 aa6.58□□□□□ -1.36
HOXD3-203ENST00000432796 NAT8Q9UHE5 227 aa6.58□□□□□ -1.36
HOXD3-203ENST00000432796 A0A1B0GW15 77 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 VCYO14598 125 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
HOXD3-203ENST00000432796 MALP21145 153 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 HIGD2BQ4VC39 106 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 ISOC2Q96AB3 205 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 SMDT1Q9H4I9 107 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
HOXD3-203ENST00000432796 IGHV1-58A0A0C4DH39 117 aa6.56□□□□□ -1.36
HOXD3-203ENST00000432796 F8W036 122 aa6.56□□□□□ -1.36
HOXD3-203ENST00000432796 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
HOXD3-203ENST00000432796 XCL1P47992 114 aa6.56□□□□□ -1.36
HOXD3-203ENST00000432796 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
HOXD3-203ENST00000432796 KRTAP26-1Q6PEX3 210 aa6.56□□□□□ -1.36
HOXD3-203ENST00000432796 AMN1Q8IY45 258 aa6.56□□□□□ -1.36
HOXD3-203ENST00000432796 CCL25O15444 150 aa6.55□□□□□ -1.36
HOXD3-203ENST00000432796 RAB4AP20338 218 aa6.55□□□□□ -1.36
HOXD3-203ENST00000432796 SUMO2P61956 95 aaKnown RBP6.55□□□□□ -1.36
HOXD3-203ENST00000432796 SDIM1Q6ZPB5 146 aa6.55□□□□□ -1.36
HOXD3-203ENST00000432796 NUP35Q8NFH5 326 aa6.55□□□□□ -1.36
HOXD3-203ENST00000432796 GVQW2A0A096LPI5 108 aaPredicted RBP6.54□□□□□ -1.36
HOXD3-203ENST00000432796 TRBV27A0A0K0K1C4 114 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 LINC00862A6NCI5 91 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 APOMO95445 188 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 TSHBP01222 138 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 CKS2P33552 79 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 CAMPP49913 170 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 RPL23P62829 140 aaKnown RBP6.54□□□□□ -1.36
HOXD3-203ENST00000432796 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 MRPL52Q86TS9 123 aaKnown RBP6.54□□□□□ -1.36
HOXD3-203ENST00000432796 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
HOXD3-203ENST00000432796 V9GYV3 84 aa6.54□□□□□ -1.36
HOXD3-203ENST00000432796 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 C1orf196B1AJZ1 125 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 LINC01600Q96MT4 127 aa6.53□□□□□ -1.36
HOXD3-203ENST00000432796 A0A087WYN8 130 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 COX7A2LO14548 114 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 ESDP10768 282 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
HOXD3-203ENST00000432796 RAB14P61106 215 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 HBBP68871 147 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 COX6A2Q02221 97 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 C20orf78Q9BR46 151 aa6.52□□□□□ -1.37
HOXD3-203ENST00000432796 SMKR1H3BMG3 65 aa6.51□□□□□ -1.37
HOXD3-203ENST00000432796 PPBPP02775 128 aa6.51□□□□□ -1.37
HOXD3-203ENST00000432796 RAB5AP20339 215 aa6.51□□□□□ -1.37
HOXD3-203ENST00000432796 FOXI1Q12951 378 aa6.51□□□□□ -1.37
HOXD3-203ENST00000432796 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
HOXD3-203ENST00000432796 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
HOXD3-203ENST00000432796 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
HOXD3-203ENST00000432796 CSDC2Q9Y534 153 aaKnown RBP6.51□□□□□ -1.37
HOXD3-203ENST00000432796 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
HOXD3-203ENST00000432796 TRAV13-1A0A0B4J241 112 aa6.5□□□□□ -1.37
HOXD3-203ENST00000432796 SMIM27A0A1W2PRY6 76 aa6.5□□□□□ -1.37
HOXD3-203ENST00000432796 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
HOXD3-203ENST00000432796 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
HOXD3-203ENST00000432796 MRPL54Q6P161 138 aaKnown RBP6.5□□□□□ -1.37
HOXD3-203ENST00000432796 STPG4Q8N801 248 aa6.5□□□□□ -1.37
HOXD3-203ENST00000432796 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
HOXD3-203ENST00000432796 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
HOXD3-203ENST00000432796 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
HOXD3-203ENST00000432796 TIMM21Q9BVV7 248 aa6.49□□□□□ -1.37
HOXD3-203ENST00000432796 SPANXA1Q9NS26 97 aa6.49□□□□□ -1.37
HOXD3-203ENST00000432796 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
HOXD3-203ENST00000432796 IGLV4-69A0A075B6H9 119 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 D6R8Y8 96 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 PHOX2AO14813 284 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
HOXD3-203ENST00000432796 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
HOXD3-203ENST00000432796 PNRC1Q12796 327 aaPredicted RBP6.48□□□□□ -1.37
HOXD3-203ENST00000432796 ORMDL3Q8N138 153 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 NRACQ8N912 160 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 SMIM2Q9BVW6 85 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 UBE2D4Q9Y2X8 147 aa6.48□□□□□ -1.37
HOXD3-203ENST00000432796 TRBV24-1A0A075B6N3 115 aa6.47□□□□□ -1.37
HOXD3-203ENST00000432796 TGIF2-C20orf24A0A0A6YYL0 155 aa6.47□□□□□ -1.37
HOXD3-203ENST00000432796 A0A0J9YXV3 536 aa6.47□□□□□ -1.37
HOXD3-203ENST00000432796 PANO1I0J062 215 aa6.47□□□□□ -1.37
HOXD3-203ENST00000432796 MT-ND4LP03901 98 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms