RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 FAM74A3Q4VXF1 159 aa11.75□□□□□ -0.53
NUP50-207ENST00000424634 NRACQ8N912 160 aa11.74□□□□□ -0.53
NUP50-207ENST00000424634 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
NUP50-207ENST00000424634 ADIRFQ15847 76 aa11.73□□□□□ -0.53
NUP50-207ENST00000424634 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
NUP50-207ENST00000424634 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
NUP50-207ENST00000424634 A0A087WYN8 130 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 GVQW2A0A096LPI5 108 aaPredicted RBP11.72□□□□□ -0.53
NUP50-207ENST00000424634 XCL1P47992 114 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
NUP50-207ENST00000424634 SPACA4Q8TDM5 124 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 NAT8Q9UHE5 227 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
NUP50-207ENST00000424634 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
NUP50-207ENST00000424634 VCYO14598 125 aa11.71□□□□□ -0.53
NUP50-207ENST00000424634 CCL25O15444 150 aa11.71□□□□□ -0.53
NUP50-207ENST00000424634 COX6A2Q02221 97 aa11.71□□□□□ -0.53
NUP50-207ENST00000424634 PRSS3P2Q8NHM4 247 aa11.71□□□□□ -0.53
NUP50-207ENST00000424634 OXTP01178 125 aa11.7□□□□□ -0.54
NUP50-207ENST00000424634 PEA15Q15121 130 aa11.7□□□□□ -0.54
NUP50-207ENST00000424634 MRPL51Q4U2R6 128 aaKnown RBP11.7□□□□□ -0.54
NUP50-207ENST00000424634 FAM104BQ5XKR9 115 aa11.7□□□□□ -0.54
NUP50-207ENST00000424634 C7orf77A4D0Y5 90 aa11.69□□□□□ -0.54
NUP50-207ENST00000424634 SUMO2P61956 95 aaKnown RBP11.69□□□□□ -0.54
NUP50-207ENST00000424634 ZNF664Q8N3J9 261 aa11.69□□□□□ -0.54
NUP50-207ENST00000424634 CAMPP49913 170 aa11.68□□□□□ -0.54
NUP50-207ENST00000424634 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
NUP50-207ENST00000424634 PLAC8Q9NZF1 115 aa11.68□□□□□ -0.54
NUP50-207ENST00000424634 PPP1R17O96001 155 aa11.67□□□□□ -0.54
NUP50-207ENST00000424634 SS18Q15532 418 aa11.67□□□□□ -0.54
NUP50-207ENST00000424634 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
NUP50-207ENST00000424634 FCER1GP30273 86 aa11.66□□□□□ -0.54
NUP50-207ENST00000424634 CD164L2Q6UWJ8 174 aa11.66□□□□□ -0.54
NUP50-207ENST00000424634 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
NUP50-207ENST00000424634 HMCN2Q8NDA2 5059 aa11.65□□□□□ -0.54
NUP50-207ENST00000424634 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.54
NUP50-207ENST00000424634 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
NUP50-207ENST00000424634 TRBV24-1A0A075B6N3 115 aa11.64□□□□□ -0.55
NUP50-207ENST00000424634 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
NUP50-207ENST00000424634 MAJINQ3KP22 176 aa11.64□□□□□ -0.55
NUP50-207ENST00000424634 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
NUP50-207ENST00000424634 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
NUP50-207ENST00000424634 A0A096LNI7 61 aa11.63□□□□□ -0.55
NUP50-207ENST00000424634 LINC00862A6NCI5 91 aa11.63□□□□□ -0.55
NUP50-207ENST00000424634 PPP1R2P9O14990 202 aa11.63□□□□□ -0.55
NUP50-207ENST00000424634 A0A1B0GW15 77 aa11.62□□□□□ -0.55
NUP50-207ENST00000424634 A0A1B0GXF2 115 aa11.62□□□□□ -0.55
NUP50-207ENST00000424634 CKS2P33552 79 aa11.62□□□□□ -0.55
NUP50-207ENST00000424634 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
NUP50-207ENST00000424634 C20orf78Q9BR46 151 aa11.62□□□□□ -0.55
NUP50-207ENST00000424634 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
NUP50-207ENST00000424634 PHOX2AO14813 284 aa11.61□□□□□ -0.55
NUP50-207ENST00000424634 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
NUP50-207ENST00000424634 RPL32P62910 135 aaKnown RBP11.61□□□□□ -0.55
NUP50-207ENST00000424634 STPG4Q8N801 248 aa11.61□□□□□ -0.55
NUP50-207ENST00000424634 FAM104AQ969W3 186 aa11.61□□□□□ -0.55
NUP50-207ENST00000424634 Q6ZUT4 128 aa11.6□□□□□ -0.55
NUP50-207ENST00000424634 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
NUP50-207ENST00000424634 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
NUP50-207ENST00000424634 D6R8Y8 96 aa11.59□□□□□ -0.55
NUP50-207ENST00000424634 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
NUP50-207ENST00000424634 HBBP68871 147 aa11.59□□□□□ -0.55
NUP50-207ENST00000424634 CARD19Q96LW7 228 aa11.59□□□□□ -0.55
NUP50-207ENST00000424634 ZNF561-AS1K7EIQ3 104 aa11.58□□□□□ -0.56
NUP50-207ENST00000424634 NPYP01303 97 aa11.58□□□□□ -0.56
NUP50-207ENST00000424634 SYCNQ0VAF6 134 aa11.58□□□□□ -0.56
NUP50-207ENST00000424634 SMAGPQ0VAQ4 97 aa11.58□□□□□ -0.56
NUP50-207ENST00000424634 Q6ZRU5 148 aa11.58□□□□□ -0.56
NUP50-207ENST00000424634 IGLV4-69A0A075B6H9 119 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 F8W036 122 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 COX7A2LO14548 114 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 C7orf33Q8WU49 177 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
NUP50-207ENST00000424634 S100A8P05109 93 aa11.56□□□□□ -0.56
NUP50-207ENST00000424634 MALP21145 153 aa11.56□□□□□ -0.56
NUP50-207ENST00000424634 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
NUP50-207ENST00000424634 TMEM18Q96B42 140 aa11.56□□□□□ -0.56
NUP50-207ENST00000424634 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
NUP50-207ENST00000424634 TCAPO15273 167 aa11.55□□□□□ -0.56
NUP50-207ENST00000424634 TNXBP22105 4242 aa11.55□□□□□ -0.56
NUP50-207ENST00000424634 LINC00474Q9P2X8 69 aa11.54□□□□□ -0.56
NUP50-207ENST00000424634 PPBPP02775 128 aa11.53□□□□□ -0.56
NUP50-207ENST00000424634 PRR3P79522 188 aaKnown RBP11.52□□□□□ -0.57
NUP50-207ENST00000424634 TMEM136Q6ZRR5 245 aa11.52□□□□□ -0.57
NUP50-207ENST00000424634 ATP5L2Q7Z4Y8 100 aa11.52□□□□□ -0.57
NUP50-207ENST00000424634 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
NUP50-207ENST00000424634 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
NUP50-207ENST00000424634 ORMDL3Q8N138 153 aa11.51□□□□□ -0.57
NUP50-207ENST00000424634 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
NUP50-207ENST00000424634 SPANXA1Q9NS26 97 aa11.51□□□□□ -0.57
NUP50-207ENST00000424634 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
NUP50-207ENST00000424634 LOC107984640A0A0U1RRK4 108 aa11.5□□□□□ -0.57
NUP50-207ENST00000424634 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
NUP50-207ENST00000424634 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
NUP50-207ENST00000424634 CAMK2N2Q96S95 79 aa11.5□□□□□ -0.57
NUP50-207ENST00000424634 IGHV3OR16-9A0A0B4J2B5 98 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms