RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 ESDP10768 282 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 EIF5AP63241 154 aaKnown RBP10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 CDC42SE2Q9NRR3 84 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 C2orf48Q96LS8 159 aa10.06□□□□□ -0.8
CHCHD3-202ENST00000423635 I3L3M4 83 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 ARPC5O15511 151 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 CCL20P78556 96 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 TEX261Q6UWH6 196 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 FAM210AQ96ND0 272 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 CAMK2N2Q96S95 79 aa10.05□□□□□ -0.8
CHCHD3-202ENST00000423635 RAB19A4D1S5 217 aa10.04□□□□□ -0.8
CHCHD3-202ENST00000423635 PMCHP20382 165 aa10.04□□□□□ -0.8
CHCHD3-202ENST00000423635 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
CHCHD3-202ENST00000423635 A0A087WZ39 114 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 MALP21145 153 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 GNG4P50150 75 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 RNF151Q2KHN1 245 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
CHCHD3-202ENST00000423635 TRAV1-1A0A0B4J248 108 aa10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 COX7A2LO14548 114 aa10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 BCL2L11O43521 198 aa10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 NUDT10Q8NFP7 164 aa10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 MANBALQ9NQG1 85 aa10.02□□□□□ -0.81
CHCHD3-202ENST00000423635 C1orf196B1AJZ1 125 aa10.01□□□□□ -0.81
CHCHD3-202ENST00000423635 TSHBP01222 138 aa10.01□□□□□ -0.81
CHCHD3-202ENST00000423635 FOXA3P55318 350 aaPredicted RBP10.01□□□□□ -0.81
CHCHD3-202ENST00000423635 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
CHCHD3-202ENST00000423635 OPRPNQ99935 248 aaPredicted RBP10.01□□□□□ -0.81
CHCHD3-202ENST00000423635 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
CHCHD3-202ENST00000423635 UBE2D1P51668 147 aa10□□□□□ -0.81
CHCHD3-202ENST00000423635 GNG13Q9P2W3 67 aa10□□□□□ -0.81
CHCHD3-202ENST00000423635 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
CHCHD3-202ENST00000423635 CARHSP1Q9Y2V2 147 aaKnown RBP9.99□□□□□ -0.81
CHCHD3-202ENST00000423635 ZNF345Q14585 488 aa9.97□□□□□ -0.81
CHCHD3-202ENST00000423635 TMEM242Q9NWH2 141 aa9.97□□□□□ -0.81
CHCHD3-202ENST00000423635 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
CHCHD3-202ENST00000423635 FAM168BA1KXE4 195 aa9.96□□□□□ -0.82
CHCHD3-202ENST00000423635 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-202ENST00000423635 RPP21Q9H633 154 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-202ENST00000423635 ST20Q9HBF5 79 aa9.96□□□□□ -0.82
CHCHD3-202ENST00000423635 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-202ENST00000423635 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
CHCHD3-202ENST00000423635 C7orf77A4D0Y5 90 aa9.95□□□□□ -0.82
CHCHD3-202ENST00000423635 PDE6DO43924 150 aa9.95□□□□□ -0.82
CHCHD3-202ENST00000423635 IMMP2LQ96T52 175 aa9.95□□□□□ -0.82
CHCHD3-202ENST00000423635 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
CHCHD3-202ENST00000423635 MED9Q9NWA0 146 aa9.95□□□□□ -0.82
CHCHD3-202ENST00000423635 MUC17Q685J3 4493 aa9.94□□□□□ -0.82
CHCHD3-202ENST00000423635 F8WDY8 70 aa9.94□□□□□ -0.82
CHCHD3-202ENST00000423635 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
CHCHD3-202ENST00000423635 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CHCHD3-202ENST00000423635 C5orf38Q86SI9 138 aa9.94□□□□□ -0.82
CHCHD3-202ENST00000423635 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
CHCHD3-202ENST00000423635 OR10D4PQ8NGN7 298 aa9.93□□□□□ -0.82
CHCHD3-202ENST00000423635 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
CHCHD3-202ENST00000423635 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
CHCHD3-202ENST00000423635 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
CHCHD3-202ENST00000423635 SMLR1H3BR10 107 aa9.9□□□□□ -0.82
CHCHD3-202ENST00000423635 K7EN84 100 aa9.9□□□□□ -0.82
CHCHD3-202ENST00000423635 TSPAN13O95857 204 aa9.9□□□□□ -0.82
CHCHD3-202ENST00000423635 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
CHCHD3-202ENST00000423635 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.82
CHCHD3-202ENST00000423635 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
CHCHD3-202ENST00000423635 HMSDA8MTL9 139 aa9.89□□□□□ -0.83
CHCHD3-202ENST00000423635 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
CHCHD3-202ENST00000423635 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
CHCHD3-202ENST00000423635 KANTRA0A1W2PQU2 76 aa9.88□□□□□ -0.83
CHCHD3-202ENST00000423635 TEX46H3BTG2 121 aa9.88□□□□□ -0.83
CHCHD3-202ENST00000423635 NDUFA1O15239 70 aa9.88□□□□□ -0.83
CHCHD3-202ENST00000423635 UBE2BP63146 152 aa9.88□□□□□ -0.83
CHCHD3-202ENST00000423635 VCYO14598 125 aa9.87□□□□□ -0.83
CHCHD3-202ENST00000423635 ZNF861PO60384 105 aa9.87□□□□□ -0.83
CHCHD3-202ENST00000423635 SMDT1Q9H4I9 107 aa9.87□□□□□ -0.83
CHCHD3-202ENST00000423635 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
CHCHD3-202ENST00000423635 M0QXV9 152 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 RAB4AP20338 218 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 ORAOV1Q8WV07 137 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 TMEM191AQ9H0A3 160 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
CHCHD3-202ENST00000423635 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
CHCHD3-202ENST00000423635 A8MWL6 223 aa9.85□□□□□ -0.83
CHCHD3-202ENST00000423635 FCER1GP30273 86 aa9.85□□□□□ -0.83
CHCHD3-202ENST00000423635 Q6ZUT4 128 aa9.84□□□□□ -0.83
CHCHD3-202ENST00000423635 GATCO43716 136 aaKnown RBP9.83□□□□□ -0.84
CHCHD3-202ENST00000423635 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
CHCHD3-202ENST00000423635 CT83Q5H943 113 aa9.82□□□□□ -0.84
CHCHD3-202ENST00000423635 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
CHCHD3-202ENST00000423635 A0A087X002 238 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms