RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 V9GYV3 84 aa11.7□□□□□ -0.54
VPS16-204ENST00000417508 COX6A2Q02221 97 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 SS18Q15532 418 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 Q6ZRU5 148 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
VPS16-204ENST00000417508 IGHV1-58A0A0C4DH39 117 aa11.68□□□□□ -0.54
VPS16-204ENST00000417508 C7orf77A4D0Y5 90 aa11.68□□□□□ -0.54
VPS16-204ENST00000417508 CHTF8P0CG12 524 aa11.68□□□□□ -0.54
VPS16-204ENST00000417508 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
VPS16-204ENST00000417508 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
VPS16-204ENST00000417508 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
VPS16-204ENST00000417508 LRP1Q07954 4544 aaKnown RBP11.67□□□□□ -0.54
VPS16-204ENST00000417508 CCL25O15444 150 aa11.67□□□□□ -0.54
VPS16-204ENST00000417508 XCL1P47992 114 aa11.67□□□□□ -0.54
VPS16-204ENST00000417508 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
VPS16-204ENST00000417508 C7orf33Q8WU49 177 aa11.67□□□□□ -0.54
VPS16-204ENST00000417508 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
VPS16-204ENST00000417508 PPP1R2P9O14990 202 aa11.66□□□□□ -0.54
VPS16-204ENST00000417508 FCER1GP30273 86 aa11.66□□□□□ -0.54
VPS16-204ENST00000417508 CD164L2Q6UWJ8 174 aa11.66□□□□□ -0.54
VPS16-204ENST00000417508 PRSS3P2Q8NHM4 247 aa11.66□□□□□ -0.54
VPS16-204ENST00000417508 SMDT1Q9H4I9 107 aa11.66□□□□□ -0.54
VPS16-204ENST00000417508 LINC00474Q9P2X8 69 aa11.66□□□□□ -0.54
VPS16-204ENST00000417508 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
VPS16-204ENST00000417508 RPL23P62829 140 aaKnown RBP11.65□□□□□ -0.54
VPS16-204ENST00000417508 MAJINQ3KP22 176 aa11.65□□□□□ -0.54
VPS16-204ENST00000417508 KIR2DL4Q99706 377 aa11.65□□□□□ -0.54
VPS16-204ENST00000417508 NAT8Q9UHE5 227 aa11.65□□□□□ -0.54
VPS16-204ENST00000417508 A0A1B0GW15 77 aa11.64□□□□□ -0.55
VPS16-204ENST00000417508 LINC00862A6NCI5 91 aa11.64□□□□□ -0.55
VPS16-204ENST00000417508 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
VPS16-204ENST00000417508 PEA15Q15121 130 aa11.64□□□□□ -0.55
VPS16-204ENST00000417508 SMIM27A0A1W2PRY6 76 aa11.63□□□□□ -0.55
VPS16-204ENST00000417508 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
VPS16-204ENST00000417508 NRACQ8N912 160 aa11.63□□□□□ -0.55
VPS16-204ENST00000417508 IGKV2-24A0A0C4DH68 120 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 TCAPO15273 167 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 ADIRFQ15847 76 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 STPG4Q8N801 248 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 TMEM18Q96B42 140 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 C20orf78Q9BR46 151 aa11.62□□□□□ -0.55
VPS16-204ENST00000417508 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
VPS16-204ENST00000417508 TIMM21Q9BVV7 248 aa11.61□□□□□ -0.55
VPS16-204ENST00000417508 TRBV24-1A0A075B6N3 115 aa11.6□□□□□ -0.55
VPS16-204ENST00000417508 PHOX2AO14813 284 aa11.6□□□□□ -0.55
VPS16-204ENST00000417508 S100A8P05109 93 aa11.6□□□□□ -0.55
VPS16-204ENST00000417508 RPL32P62910 135 aaKnown RBP11.6□□□□□ -0.55
VPS16-204ENST00000417508 SYCNQ0VAF6 134 aa11.6□□□□□ -0.55
VPS16-204ENST00000417508 MRPL51Q4U2R6 128 aaKnown RBP11.6□□□□□ -0.55
VPS16-204ENST00000417508 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
VPS16-204ENST00000417508 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
VPS16-204ENST00000417508 FAT3Q8TDW7 4589 aa11.59□□□□□ -0.55
VPS16-204ENST00000417508 A0A096LNI7 61 aa11.59□□□□□ -0.55
VPS16-204ENST00000417508 C9JQL5 133 aa11.59□□□□□ -0.55
VPS16-204ENST00000417508 PKHD1L1Q86WI1 4243 aa11.59□□□□□ -0.55
VPS16-204ENST00000417508 COX7A2LO14548 114 aa11.58□□□□□ -0.56
VPS16-204ENST00000417508 MALP21145 153 aa11.58□□□□□ -0.56
VPS16-204ENST00000417508 CKS2P33552 79 aa11.58□□□□□ -0.56
VPS16-204ENST00000417508 CAMPP49913 170 aa11.58□□□□□ -0.56
VPS16-204ENST00000417508 A0A1B0GVG6 124 aa11.57□□□□□ -0.56
VPS16-204ENST00000417508 F8W036 122 aa11.57□□□□□ -0.56
VPS16-204ENST00000417508 LINC00526Q96FQ7 95 aa11.57□□□□□ -0.56
VPS16-204ENST00000417508 PLA2G2DQ9UNK4 145 aa11.57□□□□□ -0.56
VPS16-204ENST00000417508 MT1HL1P0DM35 61 aa11.56□□□□□ -0.56
VPS16-204ENST00000417508 SRSF3P84103 164 aaKnown RBP11.55□□□□□ -0.56
VPS16-204ENST00000417508 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 TRAV13-1A0A0B4J241 112 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 LOC107984640A0A0U1RRK4 108 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 TNFRSF6BO95407 300 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 APOMO95445 188 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 PPBPP02775 128 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 HBBP68871 147 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 C2orf48Q96LS8 159 aa11.54□□□□□ -0.56
VPS16-204ENST00000417508 PRR3P79522 188 aaKnown RBP11.53□□□□□ -0.56
VPS16-204ENST00000417508 PTTG1IPP53801 180 aa11.52□□□□□ -0.57
VPS16-204ENST00000417508 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
VPS16-204ENST00000417508 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
VPS16-204ENST00000417508 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
VPS16-204ENST00000417508 D6R8Y8 96 aa11.51□□□□□ -0.57
VPS16-204ENST00000417508 RNASE13Q5GAN3 156 aaKnown RBP11.51□□□□□ -0.57
VPS16-204ENST00000417508 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
VPS16-204ENST00000417508 Q6ZUT4 128 aa11.51□□□□□ -0.57
VPS16-204ENST00000417508 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
VPS16-204ENST00000417508 F8WDY8 70 aa11.5□□□□□ -0.57
VPS16-204ENST00000417508 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
VPS16-204ENST00000417508 RNF151Q2KHN1 245 aa11.5□□□□□ -0.57
VPS16-204ENST00000417508 ATP5L2Q7Z4Y8 100 aa11.5□□□□□ -0.57
VPS16-204ENST00000417508 C5orf38Q86SI9 138 aa11.5□□□□□ -0.57
VPS16-204ENST00000417508 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
VPS16-204ENST00000417508 SPINK6Q6UWN8 80 aa11.49□□□□□ -0.57
VPS16-204ENST00000417508 Q6ZRP5 223 aa11.49□□□□□ -0.57
VPS16-204ENST00000417508 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
VPS16-204ENST00000417508 LINC01600Q96MT4 127 aa11.49□□□□□ -0.57
VPS16-204ENST00000417508 GAGE2BQ13066 116 aa11.48□□□□□ -0.57
VPS16-204ENST00000417508 NPYP01303 97 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms