RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 HIST1H2BJP06899 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 LINC00694P0DN24 101 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BOP23527 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BBP33778 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BDP58876 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BCP62807 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 RPL32P62910 135 aaKnown RBP6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST2H2BEQ16778 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 KIAA1644Q3SXP7 199 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BHQ93079 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 DNAJC30Q96LL9 226 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BNQ99877 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 HIST1H2BMQ99879 126 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 C20orf78Q9BR46 151 aa6.2□□□□□ -1.42
RFFL-203ENST00000413582 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 D6R8Y8 96 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 F5H697 171 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 M0QY20 66 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 MGPP08493 103 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 ZNF56Q15929 161 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 COA6Q5JTJ3 125 aaKnown RBP6.19□□□□□ -1.42
RFFL-203ENST00000413582 FAM74A4Q5TZK3 123 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 NIT2Q9NQR4 276 aa6.19□□□□□ -1.42
RFFL-203ENST00000413582 IGKV2D-24A0A075B6R9 120 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 K7EMI3 77 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 TNFRSF6BO95407 300 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 SUMO4Q6EEV6 95 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 NRACQ8N912 160 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 C18orf32Q8TCD1 76 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 RMI2Q96E14 147 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 MAP1LC3AQ9H492 121 aa6.18□□□□□ -1.42
RFFL-203ENST00000413582 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
RFFL-203ENST00000413582 TCAPO15273 167 aa6.17□□□□□ -1.42
RFFL-203ENST00000413582 S100A6P06703 90 aa6.17□□□□□ -1.42
RFFL-203ENST00000413582 TRAV26-2A0A0B4J265 109 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 GAGE12JA6NER3 117 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 VCYO14598 125 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 NPYP01303 97 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 ESDP10768 282 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 PMCHP20382 165 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 POLR2KP53803 58 aaKnown RBP6.16□□□□□ -1.42
RFFL-203ENST00000413582 SUMO2P61956 95 aaKnown RBP6.16□□□□□ -1.42
RFFL-203ENST00000413582 GAGE1Q13065 139 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 GAGE4Q13068 117 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 GAGE5Q13069 117 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 Q6ZRU5 148 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 NIT1Q86X76 327 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 CHCHD1Q96BP2 118 aaKnown RBP6.16□□□□□ -1.42
RFFL-203ENST00000413582 ST20Q9HBF5 79 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 Q9UF83 564 aa6.16□□□□□ -1.42
RFFL-203ENST00000413582 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 NCR2O95944 276 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 LINC00614P0C842 121 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 G0S2P27469 103 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 RPL36AP83881 106 aaKnown RBP6.15□□□□□ -1.42
RFFL-203ENST00000413582 BAGE3Q86Y29 109 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 Q8N8P6 123 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 PRSS3P2Q8NHM4 247 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.42
RFFL-203ENST00000413582 KLK12Q9UKR0 248 aa6.15□□□□□ -1.42
RFFL-203ENST00000413582 TRBV7-3A0A075B6L6 115 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 SDHAF1A6NFY7 115 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 LINC01549A6NIU2 74 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 NDUFA6P56556 154 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 FA2HQ7L5A8 372 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 NEXN-AS1Q8NBZ9 246 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 UBE2WQ96B02 151 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 RPL39LQ96EH5 51 aaKnown RBP6.14□□□□□ -1.43
RFFL-203ENST00000413582 PACRGQ96M98 296 aaPredicted RBP6.14□□□□□ -1.43
RFFL-203ENST00000413582 SMIM2Q9BVW6 85 aa6.14□□□□□ -1.43
RFFL-203ENST00000413582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
RFFL-203ENST00000413582 C5orf52A6NGY3 159 aa6.13□□□□□ -1.43
RFFL-203ENST00000413582 PANO1I0J062 215 aa6.13□□□□□ -1.43
RFFL-203ENST00000413582 I3L3M4 83 aa6.13□□□□□ -1.43
RFFL-203ENST00000413582 IFI27P40305 119 aaPredicted RBP6.13□□□□□ -1.43
RFFL-203ENST00000413582 ORMDL2Q53FV1 153 aa6.13□□□□□ -1.43
RFFL-203ENST00000413582 TMEM97Q5BJF2 176 aa6.13□□□□□ -1.43
RFFL-203ENST00000413582 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
RFFL-203ENST00000413582 LOC389332A0A1B0GUA5 103 aa6.12□□□□□ -1.43
RFFL-203ENST00000413582 SERF1AO75920 110 aa6.12□□□□□ -1.43
RFFL-203ENST00000413582 UBE2D3P61077 147 aa6.12□□□□□ -1.43
RFFL-203ENST00000413582 UBE2D2P62837 147 aa6.12□□□□□ -1.43
RFFL-203ENST00000413582 IQCJQ1A5X6 159 aa6.12□□□□□ -1.43
RFFL-203ENST00000413582 CHCHD7Q9BUK0 85 aa6.12□□□□□ -1.43
RFFL-203ENST00000413582 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
RFFL-203ENST00000413582 HSBP1O75506 76 aa6.11□□□□□ -1.43
RFFL-203ENST00000413582 SNRPEP62304 92 aaKnown RBP6.11□□□□□ -1.43
RFFL-203ENST00000413582 CTAG1AP78358 180 aa6.11□□□□□ -1.43
RFFL-203ENST00000413582 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
RFFL-203ENST00000413582 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
RFFL-203ENST00000413582 A0A087WX48 190 aa6.1□□□□□ -1.43
RFFL-203ENST00000413582 LOC105371267A0A1B0GV96 52 aa6.1□□□□□ -1.43
RFFL-203ENST00000413582 PRSS1P07477 247 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms