RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 TPPP3Q9BW30 176 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 PKIGQ9Y2B9 76 aa3.74□□□□□ -1.81
HMGN1P20-201ENST00000411849 TNXBP22105 4242 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 F5H697 171 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 H7C1H1 209 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 M0QY20 66 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 SLPIP03973 132 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 TRGC1P0CF51 173 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 RPS10P46783 165 aaKnown RBP3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 IFITM2Q01629 132 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 GAGE6Q13070 117 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 SRSF9Q13242 221 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 CFAP161Q6P656 301 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 Q6ZRP5 223 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 ZNF664Q8N3J9 261 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 ISOC2Q96AB3 205 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 V9GYV3 84 aa3.73□□□□□ -1.81
HMGN1P20-201ENST00000411849 TRAV26-2A0A0B4J265 109 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 HIGD1CA8MV81 97 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 TWIST1Q15672 202 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 CLLU1Q5K131 121 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 SUMO4Q6EEV6 95 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 NTM-AS1Q6ZSK4 140 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 PRSS3P2Q8NHM4 247 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 TSKUQ8WUA8 353 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 PGLYRP4Q96LB8 373 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 GFRA4Q9GZZ7 299 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 NIT2Q9NQR4 276 aa3.72□□□□□ -1.81
HMGN1P20-201ENST00000411849 IGHV1-24A0A0C4DH33 117 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 A0A1B0GUT8 65 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 A0A1B0GUV1 79 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 MGPP08493 103 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 RAB14P61106 215 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 ADIRFQ15847 76 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 IQCJQ1A5X6 159 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 RASL11AQ6T310 242 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 GATD1Q8NB37 220 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 NUP35Q8NFH5 326 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.82
HMGN1P20-201ENST00000411849 A0A096LNI7 61 aa3.7□□□□□ -1.82
HMGN1P20-201ENST00000411849 SMIM27A0A1W2PRY6 76 aa3.7□□□□□ -1.82
HMGN1P20-201ENST00000411849 SMIM15Q7Z3B0 74 aa3.7□□□□□ -1.82
HMGN1P20-201ENST00000411849 C15orf56Q8N910 161 aa3.7□□□□□ -1.82
HMGN1P20-201ENST00000411849 C20orf203Q8NBC4 194 aa3.7□□□□□ -1.82
HMGN1P20-201ENST00000411849 TMEM191AQ9H0A3 160 aa3.7□□□□□ -1.82
HMGN1P20-201ENST00000411849 GVQW2A0A096LPI5 108 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 GAGE12HA6NDE8 117 aa3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 RAB4AP20338 218 aa3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 RIGQ13278 110 aa3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 HIGD2BQ4VC39 106 aa3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 RPL39LQ96EH5 51 aaKnown RBP3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 TMEM243Q9BU79 118 aa3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 NAT8BQ9UHF3 227 aa3.69□□□□□ -1.82
HMGN1P20-201ENST00000411849 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 UBE2L6O14933 153 aa3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 POLR2KP53803 58 aaKnown RBP3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 PNRC1Q12796 327 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 PRR4Q16378 134 aa3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 AMN1Q8IY45 258 aa3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 BORCS7Q96B45 105 aa3.68□□□□□ -1.82
HMGN1P20-201ENST00000411849 A0A1B0GW15 77 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 A0A1B0GXF2 115 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 TMEM218A2RU14 115 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 SDHAF1A6NFY7 115 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 MT-ND6P03923 174 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 ADCYAP1P18509 176 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 COTL1Q14019 142 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 UQCC3Q6UW78 93 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 PRR26Q8N8Z3 221 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 DIRC1Q969H9 104 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 ANAPC16Q96DE5 110 aa3.67□□□□□ -1.82
HMGN1P20-201ENST00000411849 IGLV1-50A0A075B6I6 118 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 LINC00862A6NCI5 91 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 F8W036 122 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 SMKR1H3BMG3 65 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 I3L3M4 83 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 PPP1R2P9O14990 202 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 NCR2O95944 276 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 ESDP10768 282 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 PMCHP20382 165 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 CAMPP49913 170 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 MRPL54Q6P161 138 aaKnown RBP3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 NRACQ8N912 160 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 CHCHD10Q8WYQ3 142 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 CARD19Q96LW7 228 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 ST20Q9HBF5 79 aa3.66□□□□□ -1.82
HMGN1P20-201ENST00000411849 TRBV24-1A0A075B6N3 115 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 TRBV27A0A0K0K1C4 114 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 H7C423 109 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 TSHBP01222 138 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 MT-ND4LP03901 98 aa3.65□□□□□ -1.83
HMGN1P20-201ENST00000411849 AMTP48728 403 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms