RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
GCFC2-202ENST00000409857 EIF4EBP3O60516 100 aaPredicted RBP12.18□□□□□ -0.46
GCFC2-202ENST00000409857 P0DMU3 169 aa12.18□□□□□ -0.46
GCFC2-202ENST00000409857 FAM231AP0DMU4 169 aa12.18□□□□□ -0.46
GCFC2-202ENST00000409857 FAM231CP0DMU5 169 aa12.18□□□□□ -0.46
GCFC2-202ENST00000409857 LGALS3P17931 250 aaKnown RBP12.18□□□□□ -0.46
GCFC2-202ENST00000409857 C10orf126Q8N4M7 172 aa12.18□□□□□ -0.46
GCFC2-202ENST00000409857 C9orf85Q96MD7 179 aa12.18□□□□□ -0.46
GCFC2-202ENST00000409857 A0A0J9YX75 114 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 TRBV6-5A0A0K0K1A5 114 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 MT-ATP8P03928 68 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 SCGB1C2P0DMR2 95 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 MRAPQ8TCY5 172 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 PRO1854Q9UHT4 67 aa12.17□□□□□ -0.46
GCFC2-202ENST00000409857 A4D1N5 150 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 H3BMM0 161 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 H7C2G1 150 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
GCFC2-202ENST00000409857 STHQ8IWL8 128 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 RBMY1BA6NDE4 496 aaKnown RBP12.16□□□□□ -0.46
GCFC2-202ENST00000409857 RBMY1EA6NEQ0 496 aaKnown RBP12.16□□□□□ -0.46
GCFC2-202ENST00000409857 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 A8MTW9 85 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 RBMY1DP0C7P1 496 aaKnown RBP12.16□□□□□ -0.46
GCFC2-202ENST00000409857 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
GCFC2-202ENST00000409857 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
GCFC2-202ENST00000409857 TEN1Q86WV5 123 aa12.15□□□□□ -0.46
GCFC2-202ENST00000409857 XGP55808 180 aa12.15□□□□□ -0.46
GCFC2-202ENST00000409857 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
GCFC2-202ENST00000409857 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 FBN3Q75N90 2809 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 ANKRD29Q8N6D5 301 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 PPDPFLQ8WWR9 84 aa12.14□□□□□ -0.47
GCFC2-202ENST00000409857 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
GCFC2-202ENST00000409857 TRBV20-1A0A075B6N2 111 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 IGHV3-73A0A0B4J1V6 119 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 A8MWV9 139 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 LEPROTO15243 131 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 Q6ZUT4 128 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
GCFC2-202ENST00000409857 IGHV1OR15-1A0A075B7D0 117 aa12.12□□□□□ -0.47
GCFC2-202ENST00000409857 APOC4P55056 127 aa12.12□□□□□ -0.47
GCFC2-202ENST00000409857 RHODO00212 210 aa12.12□□□□□ -0.47
GCFC2-202ENST00000409857 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
GCFC2-202ENST00000409857 SS18L2Q9UHA2 77 aa12.12□□□□□ -0.47
GCFC2-202ENST00000409857 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 HTN1P15515 57 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 RNF183Q96D59 192 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 IGHV3-33P01772 117 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 RPL35AP18077 110 aaKnown RBP12.11□□□□□ -0.47
GCFC2-202ENST00000409857 RHOHQ15669 191 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
GCFC2-202ENST00000409857 ODF3Q96PU9 254 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
GCFC2-202ENST00000409857 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
GCFC2-202ENST00000409857 C9JAW5 83 aa12.1□□□□□ -0.47
GCFC2-202ENST00000409857 I3L3M4 83 aa12.1□□□□□ -0.47
GCFC2-202ENST00000409857 PRM2P04554 102 aa12.1□□□□□ -0.47
GCFC2-202ENST00000409857 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
GCFC2-202ENST00000409857 B9D2Q9BPU9 175 aa12.1□□□□□ -0.47
GCFC2-202ENST00000409857 SPXQ9BT56 116 aa12.1□□□□□ -0.47
GCFC2-202ENST00000409857 VCX2Q9H322 139 aa12.1□□□□□ -0.47
GCFC2-202ENST00000409857 SLC25A20O43772 301 aa12.08□□□□□ -0.48
GCFC2-202ENST00000409857 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
GCFC2-202ENST00000409857 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
GCFC2-202ENST00000409857 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
GCFC2-202ENST00000409857 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
GCFC2-202ENST00000409857 Q9UF83 564 aa12.08□□□□□ -0.48
GCFC2-202ENST00000409857 TRAV8-3A0A0A6YYJ7 113 aa12.07□□□□□ -0.48
GCFC2-202ENST00000409857 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
GCFC2-202ENST00000409857 GIG44P09565 113 aaPredicted RBP12.07□□□□□ -0.48
GCFC2-202ENST00000409857 Q1RN00 199 aa12.06□□□□□ -0.48
GCFC2-202ENST00000409857 M0R2P5 195 aa12.06□□□□□ -0.48
GCFC2-202ENST00000409857 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
GCFC2-202ENST00000409857 A0A0B4J2C4 111 aa12.05□□□□□ -0.48
GCFC2-202ENST00000409857 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
GCFC2-202ENST00000409857 GAGE5Q13069 117 aa12.04□□□□□ -0.48
GCFC2-202ENST00000409857 GAGE6Q13070 117 aa12.04□□□□□ -0.48
GCFC2-202ENST00000409857 CSNK1G2-AS1Q8NCQ2 148 aa12.04□□□□□ -0.48
GCFC2-202ENST00000409857 PRSS2P07478 247 aa12.03□□□□□ -0.48
GCFC2-202ENST00000409857 NHLRC4P0CG21 123 aaPredicted RBP12.03□□□□□ -0.48
GCFC2-202ENST00000409857 NPC2P61916 151 aa12.03□□□□□ -0.48
GCFC2-202ENST00000409857 ADAMTSL4-AS1Q5T5F5 129 aa12.03□□□□□ -0.48
GCFC2-202ENST00000409857 LITAFQ99732 161 aa12.03□□□□□ -0.48
GCFC2-202ENST00000409857 TIMM21Q9BVV7 248 aa12.03□□□□□ -0.48
GCFC2-202ENST00000409857 PRKDCP78527 4128 aaKnown RBP12.03□□□□□ -0.48
GCFC2-202ENST00000409857 ANAPC13Q9BS18 74 aa12.02□□□□□ -0.48
GCFC2-202ENST00000409857 Q6ZSN1 163 aa12.02□□□□□ -0.49
GCFC2-202ENST00000409857 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
GCFC2-202ENST00000409857 XCL2Q9UBD3 114 aa12.02□□□□□ -0.49
GCFC2-202ENST00000409857 TRGV11A0A075B6L2 103 aa12.01□□□□□ -0.49
GCFC2-202ENST00000409857 TRIAP1O43715 76 aa12.01□□□□□ -0.49
GCFC2-202ENST00000409857 INSP01308 110 aa12.01□□□□□ -0.49
GCFC2-202ENST00000409857 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
GCFC2-202ENST00000409857 MRPS36P82909 103 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms