RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 BRI3O95415 125 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 Q6ZSN1 163 aa9.84□□□□□ -0.83
COL6A2-204ENST00000409416 Q6ZTI0 123 aa9.83□□□□□ -0.84
COL6A2-204ENST00000409416 TCL1BO95988 128 aa9.83□□□□□ -0.84
COL6A2-204ENST00000409416 IFITM1P13164 125 aa9.83□□□□□ -0.84
COL6A2-204ENST00000409416 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
COL6A2-204ENST00000409416 TRGV4A0A0C4DH28 118 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 CFC1BP0CG36 223 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 CFC1P0CG37 223 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 C9JAW5 83 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 I3L3M4 83 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 DSCR9P59020 149 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 A8MWV9 139 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 NFE4Q86UQ8 179 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 TIMM17AQ99595 171 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 PRO1854Q9UHT4 67 aa9.82□□□□□ -0.84
COL6A2-204ENST00000409416 K7EMT4 169 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 MAP6D1Q9H9H5 199 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 UBE2L6O14933 153 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 ELANEP08246 267 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 Q6YL49 198 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 PPDPFLQ8WWR9 84 aa9.81□□□□□ -0.84
COL6A2-204ENST00000409416 NDUFV3P56181 108 aaKnown RBP9.8□□□□□ -0.84
COL6A2-204ENST00000409416 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 PRO0461Q9UI25 63 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 LGALS9O00182 355 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 IGHV3-30P01768 117 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 RNASE1P07998 156 aaKnown RBP9.8□□□□□ -0.84
COL6A2-204ENST00000409416 IGHV3-30-5P0DP03 117 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 UBE2D1P51668 147 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 TENM1Q9UKZ4 2725 aa9.8□□□□□ -0.84
COL6A2-204ENST00000409416 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 RBMY1BA6NDE4 496 aaKnown RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 RBMY1EA6NEQ0 496 aaKnown RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 H3BMM0 161 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 NXPH4O95158 308 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 RBMY1DP0C7P1 496 aaKnown RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 SLC25A29Q8N8R3 303 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 NSD1Q96L73 2696 aaPredicted RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 INSP01308 110 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 ZNF22P17026 224 aaPredicted RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 ZNF415Q09FC8 603 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 CFAP126Q5VTH2 177 aa9.79□□□□□ -0.84
COL6A2-204ENST00000409416 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
COL6A2-204ENST00000409416 OTOGQ6ZRI0 2925 aa9.78□□□□□ -0.84
COL6A2-204ENST00000409416 RHODO00212 210 aa9.78□□□□□ -0.84
COL6A2-204ENST00000409416 ZNF469Q96JG9 3925 aaPredicted RBP9.78□□□□□ -0.84
COL6A2-204ENST00000409416 IGLV4-3A0A075B6K6 122 aa9.78□□□□□ -0.84
COL6A2-204ENST00000409416 ANKRD29Q8N6D5 301 aa9.77□□□□□ -0.85
COL6A2-204ENST00000409416 LEPROTO15243 131 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 FHL3Q13643 280 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 PFN2P35080 140 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 RHOHQ15669 191 aa9.76□□□□□ -0.85
COL6A2-204ENST00000409416 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
COL6A2-204ENST00000409416 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
COL6A2-204ENST00000409416 SLC25A20O43772 301 aa9.75□□□□□ -0.85
COL6A2-204ENST00000409416 DEFB114Q30KQ6 69 aa9.75□□□□□ -0.85
COL6A2-204ENST00000409416 OR13C6PQ8NH95 151 aa9.75□□□□□ -0.85
COL6A2-204ENST00000409416 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
COL6A2-204ENST00000409416 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
COL6A2-204ENST00000409416 NDUFA12Q9UI09 145 aa9.74□□□□□ -0.85
COL6A2-204ENST00000409416 C15orf53Q8NAA6 179 aa9.74□□□□□ -0.85
COL6A2-204ENST00000409416 M0R2P5 195 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 CRLF1O75462 422 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 A0A0J9YXY3 114 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 TEN1Q86WV5 123 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 UBE2D3P61077 147 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 UBE2D2P62837 147 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
COL6A2-204ENST00000409416 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 NTN5Q8WTR8 489 aaPredicted RBP9.72□□□□□ -0.85
COL6A2-204ENST00000409416 CR1P17927 2039 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 INAFM1C9JVW0 142 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 J3QLI3 93 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 RS1O15537 224 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
COL6A2-204ENST00000409416 TRAV8-4A0A0B4J246 113 aa9.71□□□□□ -0.85
COL6A2-204ENST00000409416 RPL36AP83881 106 aaKnown RBP9.71□□□□□ -0.85
COL6A2-204ENST00000409416 RPL36ALQ969Q0 106 aaKnown RBP9.71□□□□□ -0.85
COL6A2-204ENST00000409416 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
COL6A2-204ENST00000409416 AMELXQ99217 191 aa9.71□□□□□ -0.86
COL6A2-204ENST00000409416 J3QKU1 62 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 LINC00694P0DN24 101 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms