RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 TIMM21Q9BVV7 248 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 GTSF1LQ9H1H1 148 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 TRBV25-1A0A075B6N4 114 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 GAGE12JA6NER3 117 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 LYRM9A8MSI8 78 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 F8WDY8 70 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 EMP1P54849 157 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 GAGE1Q13065 139 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 GAGE4Q13068 117 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 GAGE5Q13069 117 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 FHL2Q14192 279 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 GAGE13Q4V321 117 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 TMEM170BQ5T4T1 132 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 LINC00612Q8N6U2 182 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 UBE2D4Q9Y2X8 147 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 CSDC2Q9Y534 153 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 X6R8D5 127 aa4.46□□□□□ -1.7
GTF3C3-202ENST00000409364 DEFB130BP0DP73 79 aa4.45□□□□□ -1.7
GTF3C3-202ENST00000409364 DEFB130AP0DP74 79 aa4.45□□□□□ -1.7
GTF3C3-202ENST00000409364 TAL2Q16559 108 aa4.45□□□□□ -1.7
GTF3C3-202ENST00000409364 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
GTF3C3-202ENST00000409364 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 IGKV2-29A2NJV5 120 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 A6NDN8 102 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 H7C423 109 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 MIFP14174 115 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 MAPKAPK5-AS1Q8N8E1 139 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 FAM104AQ969W3 186 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 CHAC1Q9BUX1 264 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 TENM1Q9UKZ4 2725 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 VWFP04275 2813 aa4.44□□□□□ -1.7
GTF3C3-202ENST00000409364 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 IGHV4-30-4P0DP06 118 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 DEFB135Q30KP9 77 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 CEMP1Q6PRD7 247 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 NTM-AS1Q6ZSK4 140 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 RNF183Q96D59 192 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 TMEM243Q9BU79 118 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 TM2D2Q9BX73 214 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 TMEM223A0PJW6 202 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 A8MZ25 164 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 LEPROTO15243 131 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 ZNF22P17026 224 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 ZNF25P17030 456 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 TIRAPP58753 221 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 FAM222AQ5U5X8 452 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 PRIMA1Q86XR5 153 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 PLEKHB2Q96CS7 222 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 MDFIQ99750 246 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 PRO0255Q9UI72 69 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
GTF3C3-202ENST00000409364 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 J3QQQ9 107 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 UBE2L6O14933 153 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 SPART-AS1P0CW21 52 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 LGALS3P17931 250 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 EGFEM1PQ0D2K5 195 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 AMMECR1LQ6DCA0 310 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 SCGB1D4Q6XE38 83 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 SBSPONQ8IVN8 264 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 CEND1Q8N111 149 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 OR5A1Q8NGJ0 315 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-202ENST00000409364 NACAE9PAV3 2078 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 TRBV6-8A0A0A6YYG3 113 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 LOC100131303A0A0U1RQF7 123 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 TEX48A0A1B0GUV7 120 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 H3BRM9 83 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 TAX1BP3O14907 124 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 SMIM13P0DJ93 91 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 GCSHP23434 173 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 UBE2D1P51668 147 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 PTTG1IPP53801 180 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 DAD1P61803 113 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 Q6ZUT4 128 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 ATP6V0E2Q8NHE4 81 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 C1orf43Q9BWL3 253 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 CDC42SE2Q9NRR3 84 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 FBN1P35555 2871 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 GYPEP15421 78 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 HERVK_113P63121 156 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 TNP2Q05952 138 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 RNASE13Q5GAN3 156 aaKnown RBP4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 Q8NAQ8 132 aa4.41□□□□□ -1.7
GTF3C3-202ENST00000409364 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.71
GTF3C3-202ENST00000409364 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms