RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, human

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-208	ENST00000407417	ZNF415	Q09FC8	603 aa		6.28	□□□□□ -1.4
NFIA-208	ENST00000407417	MIA	Q16674	131 aa		6.28	□□□□□ -1.4
NFIA-208	ENST00000407417	MINOS1	Q5TGZ0	78 aa		6.28	□□□□□ -1.4
NFIA-208	ENST00000407417	MINOS1-NBL1	R4GNA1	71 aa		6.28	□□□□□ -1.4
NFIA-208	ENST00000407417	TRBV7-1	A0A0A6YYK4	115 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417		F8W735	103 aa	Predicted RBP	6.27	□□□□□ -1.41
NFIA-208	ENST00000407417		I3L3M4	83 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	PSMB8	P28062	276 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	KRTAP10-3	P60369	221 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	LINC01006	Q8NI28	216 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	COPS9	Q8WXC6	57 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	RPL39L	Q96EH5	51 aa	Known RBP	6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	JPT2	Q9H910	190 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	DPM3	Q9P2X0	92 aa		6.27	□□□□□ -1.41
NFIA-208	ENST00000407417	CLPSL1	A2RUU4	121 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417		A6NDX4	124 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	EPM2A	B3EWF7	344 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	BUB1B-PAK6	H3BSN5	160 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	APELA	P0DMC3	54 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	NSUN5P1	Q3KNT7	163 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	TRAV21	A0A0B4J279	112 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	LY6L	H3BQJ8	138 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	COX7A2L	O14548	114 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417		Q6JHZ5	121 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	NPB	Q8NG41	125 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	FANCD2OS	Q96PS1	177 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	PYGO1	Q9Y3Y4	419 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	PHLDA3	Q9Y5J5	127 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	PLXNB1	O43157	2135 aa		6.26	□□□□□ -1.41
NFIA-208	ENST00000407417	BUB3	O43684	328 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	C4orf26	Q17RF5	130 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	KLK9	Q2XQG4	91 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	HIST2H2BD	Q6DRA6	164 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	RNF182	Q8N6D2	247 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	LINC00477	Q96M19	166 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	C16orf95	Q9H693	158 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	KLK9	Q9UKQ9	250 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	TRAV8-3	A0A0A6YYJ7	113 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	IGHV3-72	A0A0B4J1Y9	119 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	PRAC2	D3DTV9	90 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	NBR2	O15453	112 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	PROK1	P58294	105 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	CLEC2B	Q92478	149 aa		6.25	□□□□□ -1.41
NFIA-208	ENST00000407417	CTSG	P08311	255 aa		6.24	□□□□□ -1.41
NFIA-208	ENST00000407417	HRCT1	Q6UXD1	115 aa		6.24	□□□□□ -1.41
NFIA-208	ENST00000407417	ZNF702P	Q9H963	129 aa		6.24	□□□□□ -1.41
NFIA-208	ENST00000407417	KIF25-AS1	Q9Y6Z4	181 aa		6.24	□□□□□ -1.41
NFIA-208	ENST00000407417	IGHV3-30-3	P0DP02	117 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	S100A4	P26447	101 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	BLCAP	P62952	87 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	MRPS36	P82909	103 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	APRG1	Q8IVJ8	170 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	FAM19A4	Q96LR4	140 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	OVOL2	Q9BRP0	275 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	TRAV41	A0A0B4J266	112 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	IGHV1-58	A0A0C4DH39	117 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	OXT	P01178	125 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	MGP	P08493	103 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	RNASE4	P34096	147 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	LINC00315	P59091	139 aa		6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	DAZ2	Q13117	558 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	DAZ4	Q86SG3	579 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	DAZ1	Q9NQZ3	744 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	DAZ3	Q9NR90	486 aa	Known RBP	6.23	□□□□□ -1.41
NFIA-208	ENST00000407417	BCE1	O60756	84 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	PRSS2	P07478	247 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	NPC2	P61916	151 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	BEAN1	Q3B7T3	259 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	C11orf44	Q8N8P7	122 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	EEF1AKMT3	Q96AZ1	226 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	TRAV12-2	A0A075B6T6	113 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	PRB4	P10163	310 aa	Predicted RBP	6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	IGFL4	Q6B9Z1	124 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417		Q8N2B8	174 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	SERP1	Q9Y6X1	66 aa		6.22	□□□□□ -1.41
NFIA-208	ENST00000407417	NBEAL1	Q6ZS30	2694 aa		6.21	□□□□□ -1.41
NFIA-208	ENST00000407417	PFN2	P35080	140 aa		6.21	□□□□□ -1.42
NFIA-208	ENST00000407417	SYNJ2BP	P57105	145 aa		6.21	□□□□□ -1.42
NFIA-208	ENST00000407417	TIRAP	P58753	221 aa		6.21	□□□□□ -1.42
NFIA-208	ENST00000407417	RPL39	P62891	51 aa	Known RBP	6.21	□□□□□ -1.42
NFIA-208	ENST00000407417	ATP5EP2	Q5VTU8	51 aa		6.21	□□□□□ -1.42
NFIA-208	ENST00000407417	DSCR8	Q96T75	97 aa		6.21	□□□□□ -1.42
NFIA-208	ENST00000407417	TINCR	A0A1B0GVN0	87 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	LCE2D	Q5TA82	110 aa	Predicted RBP	6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	C20orf203	Q8NBC4	194 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	C9orf85	Q96MD7	179 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	NDUFA12	Q9UI09	145 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	BAALC-AS2	P0C853	105 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	CIRBP	Q14011	172 aa	Known RBP	6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	ZFAND2A	Q8N6M9	145 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	VSIG2	Q96IQ7	327 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	CYSTM1	Q9H1C7	97 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	MOB4	Q9Y3A3	225 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417		U3KQE9	123 aa		6.2	□□□□□ -1.42
NFIA-208	ENST00000407417	PKD1L1	Q8TDX9	2849 aa		6.19	□□□□□ -1.42
NFIA-208	ENST00000407417	USP17L23	D6RBM5	183 aa		6.19	□□□□□ -1.42
NFIA-208	ENST00000407417	SPRY2	O43597	315 aa		6.19	□□□□□ -1.42
NFIA-208	ENST00000407417	PF4	P02776	101 aa		6.19	□□□□□ -1.42
NFIA-208	ENST00000407417	RNASE3	P12724	160 aa	Known RBP	6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms