RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
SPTLC1P3-201ENST00000403408 RAB19A4D1S5 217 aa7.05□□□□□ -1.28
SPTLC1P3-201ENST00000403408 TRGC1P0CF51 173 aa7.05□□□□□ -1.28
SPTLC1P3-201ENST00000403408 CTRLP40313 264 aa7.05□□□□□ -1.28
SPTLC1P3-201ENST00000403408 CCL20P78556 96 aa7.05□□□□□ -1.28
SPTLC1P3-201ENST00000403408 C11orf52Q96A22 123 aa7.05□□□□□ -1.28
SPTLC1P3-201ENST00000403408 TRBV20OR9-2A0A075B6H5 130 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 A0A087WZ39 114 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 F2Z2F3 143 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 BCL2L11O43521 198 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 TSPAN13O95857 204 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 TSHBP01222 138 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 GIPP09681 153 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 ZNF25P17030 456 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 RPS20P60866 119 aaKnown RBP7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 C9orf62Q8N4C0 152 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 FAM213BQ8TBF2 198 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 CNFNQ9BYD5 112 aa7.04□□□□□ -1.28
SPTLC1P3-201ENST00000403408 KCNRGQ8N5I3 272 aa7.03□□□□□ -1.28
SPTLC1P3-201ENST00000403408 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
SPTLC1P3-201ENST00000403408 KRTAP9-9Q9BYP9 154 aa7.03□□□□□ -1.28
SPTLC1P3-201ENST00000403408 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
SPTLC1P3-201ENST00000403408 PFDN1O60925 122 aa7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 IFNA1P01562 189 aa7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 SS18Q15532 418 aa7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 TWIST1Q15672 202 aa7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 RNASE7Q9H1E1 156 aaKnown RBP7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.29
SPTLC1P3-201ENST00000403408 EIF5AP63241 154 aaKnown RBP7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 RNASE13Q5GAN3 156 aaKnown RBP7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 MRPL52Q86TS9 123 aaKnown RBP7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 NUDT10Q8NFP7 164 aa7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 ISOC2Q96AB3 205 aa7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 NUDT11Q96G61 164 aa7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 C2orf48Q96LS8 159 aa7.01□□□□□ -1.29
SPTLC1P3-201ENST00000403408 COX7A2LO14548 114 aa7□□□□□ -1.29
SPTLC1P3-201ENST00000403408 TMEM101Q96IK0 257 aa7□□□□□ -1.29
SPTLC1P3-201ENST00000403408 CRCT1Q9UGL9 99 aa7□□□□□ -1.29
SPTLC1P3-201ENST00000403408 TRBV6-5A0A0K0K1A5 114 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 I3L3M4 83 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 ARPC5O15511 151 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 PMCHP20382 165 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 UBE2D1P51668 147 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 BTF3L4Q96K17 158 aa6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 RPP21Q9H633 154 aaKnown RBP6.99□□□□□ -1.29
SPTLC1P3-201ENST00000403408 A0A087X002 238 aa6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 TRAV1-1A0A0B4J248 108 aa6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 SMLR1H3BR10 107 aa6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 MALP21145 153 aa6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 POLR2KP53803 58 aaKnown RBP6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 SPAG11BQ08648 103 aa6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 EIF5AL1Q6IS14 154 aaKnown RBP6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 GNG13Q9P2W3 67 aa6.98□□□□□ -1.29
SPTLC1P3-201ENST00000403408 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
SPTLC1P3-201ENST00000403408 K7EN84 100 aa6.97□□□□□ -1.29
SPTLC1P3-201ENST00000403408 GNG4P50150 75 aa6.97□□□□□ -1.29
SPTLC1P3-201ENST00000403408 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
SPTLC1P3-201ENST00000403408 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
SPTLC1P3-201ENST00000403408 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
SPTLC1P3-201ENST00000403408 TRAV13-1A0A0B4J241 112 aa6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 XKRY2A2RUG3 117 aa6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 C1orf196B1AJZ1 125 aa6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
SPTLC1P3-201ENST00000403408 UMAD1C9J7I0 102 aa6.95□□□□□ -1.3
SPTLC1P3-201ENST00000403408 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
SPTLC1P3-201ENST00000403408 Q6ZUT4 128 aa6.95□□□□□ -1.3
SPTLC1P3-201ENST00000403408 SMIM12Q96EX1 92 aa6.95□□□□□ -1.3
SPTLC1P3-201ENST00000403408 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
SPTLC1P3-201ENST00000403408 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
SPTLC1P3-201ENST00000403408 C7orf77A4D0Y5 90 aa6.94□□□□□ -1.3
SPTLC1P3-201ENST00000403408 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
SPTLC1P3-201ENST00000403408 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
SPTLC1P3-201ENST00000403408 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
SPTLC1P3-201ENST00000403408 M0QXV9 152 aa6.93□□□□□ -1.3
SPTLC1P3-201ENST00000403408 ZNF861PO60384 105 aa6.93□□□□□ -1.3
SPTLC1P3-201ENST00000403408 SMDT1Q9H4I9 107 aa6.93□□□□□ -1.3
SPTLC1P3-201ENST00000403408 ST20Q9HBF5 79 aa6.93□□□□□ -1.3
SPTLC1P3-201ENST00000403408 MANBALQ9NQG1 85 aa6.93□□□□□ -1.3
SPTLC1P3-201ENST00000403408 SMKR1H3BMG3 65 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 TEX261Q6UWH6 196 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 OCC1Q8TAD7 63 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 TSKUQ8WUA8 353 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 MED9Q9NWA0 146 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
SPTLC1P3-201ENST00000403408 IGHV3OR16-9A0A0B4J2B5 98 aa6.91□□□□□ -1.3
SPTLC1P3-201ENST00000403408 UBE2BP63146 152 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms