RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 GAGE2EQ4V326 116 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 CITED2Q99967 270 aaPredicted RBP8.07□□□□□ -1.12
SCFD2-202ENST00000401642 GAGE2DQ9UEU5 116 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 DNAJC9-AS1A6NH13 148 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
SCFD2-202ENST00000401642 ZNF415Q09FC8 603 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 VWFP04275 2813 aa8.07□□□□□ -1.12
SCFD2-202ENST00000401642 TRBV6-5A0A0K0K1A5 114 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 NDUFA11Q86Y39 141 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 TIMM21Q9BVV7 248 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 TRAV13-1A0A0B4J241 112 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 ESM1Q9NQ30 184 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
SCFD2-202ENST00000401642 CSDC2Q9Y534 153 aaKnown RBP8.06□□□□□ -1.12
SCFD2-202ENST00000401642 TMEM89A2RUT3 159 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 INSP01308 110 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
SCFD2-202ENST00000401642 ODF3L2Q3SX64 289 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 Q6ZTI0 123 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 CCL24O00175 119 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 RHOHQ15669 191 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
SCFD2-202ENST00000401642 ATRQ13535 2644 aa8.05□□□□□ -1.12
SCFD2-202ENST00000401642 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 TCL1BO95988 128 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 C5orf47Q569G3 176 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 SLC25A29Q8N8R3 303 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 CARD19Q96LW7 228 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 SMR3AQ99954 134 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 C4orf3Q8WVX3 66 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 A8MWV9 139 aa8.04□□□□□ -1.12
SCFD2-202ENST00000401642 CRLF1O75462 422 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 FSHBP01225 129 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 IFITM1P13164 125 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 SNCGO76070 127 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 UBE2D1P51668 147 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 AMELXQ99217 191 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 NDUFA12Q9UI09 145 aa8.03□□□□□ -1.12
SCFD2-202ENST00000401642 LEPROTO15243 131 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 LINC00694P0DN24 101 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 C9JAW5 83 aa8.02□□□□□ -1.13
SCFD2-202ENST00000401642 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
SCFD2-202ENST00000401642 C1orf158Q8N1D5 194 aa8.01□□□□□ -1.13
SCFD2-202ENST00000401642 CHCHD7Q9BUK0 85 aa8.01□□□□□ -1.13
SCFD2-202ENST00000401642 C11orf72Q8NBR9 251 aa8□□□□□ -1.13
SCFD2-202ENST00000401642 PPDPFLQ8WWR9 84 aa8□□□□□ -1.13
SCFD2-202ENST00000401642 COX6A2Q02221 97 aa8□□□□□ -1.13
SCFD2-202ENST00000401642 KRTAP1-3Q8IUG1 177 aa8□□□□□ -1.13
SCFD2-202ENST00000401642 FAM104AQ969W3 186 aa8□□□□□ -1.13
SCFD2-202ENST00000401642 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
SCFD2-202ENST00000401642 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.99□□□□□ -1.13
SCFD2-202ENST00000401642 FLNBO75369 2602 aaKnown RBP7.99□□□□□ -1.13
SCFD2-202ENST00000401642 TRAV25A0A0B4J276 109 aa7.99□□□□□ -1.13
SCFD2-202ENST00000401642 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
SCFD2-202ENST00000401642 SMIM9A6NGZ8 99 aa7.98□□□□□ -1.13
SCFD2-202ENST00000401642 DEFB130BP0DP73 79 aa7.98□□□□□ -1.13
SCFD2-202ENST00000401642 DEFB130AP0DP74 79 aa7.98□□□□□ -1.13
SCFD2-202ENST00000401642 A0A096LPF7 62 aa7.98□□□□□ -1.13
SCFD2-202ENST00000401642 RNF152Q8N8N0 203 aa7.98□□□□□ -1.13
SCFD2-202ENST00000401642 CHCHD5Q9BSY4 110 aa7.98□□□□□ -1.13
SCFD2-202ENST00000401642 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
SCFD2-202ENST00000401642 LINC01006Q8NI28 216 aa7.97□□□□□ -1.13
SCFD2-202ENST00000401642 C11orf68Q9H3H3 251 aaKnown RBP7.97□□□□□ -1.13
SCFD2-202ENST00000401642 PDZD2O15018 2839 aa7.97□□□□□ -1.13
SCFD2-202ENST00000401642 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
SCFD2-202ENST00000401642 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
SCFD2-202ENST00000401642 OTOGQ6ZRI0 2925 aa7.97□□□□□ -1.13
SCFD2-202ENST00000401642 IGHV1-58A0A0C4DH39 117 aa7.96□□□□□ -1.13
SCFD2-202ENST00000401642 Q9H8V8 135 aa7.96□□□□□ -1.13
SCFD2-202ENST00000401642 RPL36AP83881 106 aaKnown RBP7.96□□□□□ -1.14
SCFD2-202ENST00000401642 TEN1Q86WV5 123 aa7.96□□□□□ -1.14
SCFD2-202ENST00000401642 ANKRD29Q8N6D5 301 aa7.96□□□□□ -1.14
SCFD2-202ENST00000401642 RPL36ALQ969Q0 106 aaKnown RBP7.96□□□□□ -1.14
SCFD2-202ENST00000401642 UBE2D3P61077 147 aa7.96□□□□□ -1.14
SCFD2-202ENST00000401642 UBE2D2P62837 147 aa7.96□□□□□ -1.14
SCFD2-202ENST00000401642 MRPS36P82909 103 aaKnown RBP7.96□□□□□ -1.14
SCFD2-202ENST00000401642 VSIG2Q96IQ7 327 aa7.96□□□□□ -1.14
SCFD2-202ENST00000401642 TRGV4A0A0C4DH28 118 aa7.95□□□□□ -1.14
SCFD2-202ENST00000401642 UBE2L6O14933 153 aa7.95□□□□□ -1.14
SCFD2-202ENST00000401642 DEFB4AO15263 64 aa7.95□□□□□ -1.14
SCFD2-202ENST00000401642 ATP6V0E2Q8NHE4 81 aa7.95□□□□□ -1.14
SCFD2-202ENST00000401642 TMEM263Q8WUH6 116 aaKnown RBP7.95□□□□□ -1.14
SCFD2-202ENST00000401642 SLC25A20O43772 301 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms