RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 GAGE2BQ13066 116 aa8.93□□□□□ -0.98
VAMP1-203ENST00000400911 ZNF561-AS1K7EIQ3 104 aa8.92□□□□□ -0.98
VAMP1-203ENST00000400911 CTRLP40313 264 aa8.92□□□□□ -0.98
VAMP1-203ENST00000400911 FOXA3P55318 350 aaPredicted RBP8.92□□□□□ -0.98
VAMP1-203ENST00000400911 COMMD7Q86VX2 200 aa8.92□□□□□ -0.98
VAMP1-203ENST00000400911 SMIM12Q96EX1 92 aa8.92□□□□□ -0.98
VAMP1-203ENST00000400911 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 SDHAF1A6NFY7 115 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 ZNF25P17030 456 aaPredicted RBP8.91□□□□□ -0.98
VAMP1-203ENST00000400911 UQCC3Q6UW78 93 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 NUDT10Q8NFP7 164 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 NUDT11Q96G61 164 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 TMEM101Q96IK0 257 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 BTF3L4Q96K17 158 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
VAMP1-203ENST00000400911 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
VAMP1-203ENST00000400911 SRP19P09132 144 aaKnown RBP8.9□□□□□ -0.98
VAMP1-203ENST00000400911 NDUFA5Q16718 116 aa8.9□□□□□ -0.98
VAMP1-203ENST00000400911 LOC107984640A0A0U1RRK4 108 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 MT-ND6P03923 174 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 PMCHP20382 165 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 CAMPP49913 170 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 SS18Q15532 418 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 FAM74A3Q4VXF1 159 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 SMIM7Q9BQ49 75 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 BIN3Q9NQY0 253 aa8.89□□□□□ -0.99
VAMP1-203ENST00000400911 IGLV4-69A0A075B6H9 119 aa8.88□□□□□ -0.99
VAMP1-203ENST00000400911 I3L3M4 83 aa8.88□□□□□ -0.99
VAMP1-203ENST00000400911 SRSF3P84103 164 aaKnown RBP8.88□□□□□ -0.99
VAMP1-203ENST00000400911 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
VAMP1-203ENST00000400911 PRR26Q8N8Z3 221 aa8.88□□□□□ -0.99
VAMP1-203ENST00000400911 ESDP10768 282 aa8.87□□□□□ -0.99
VAMP1-203ENST00000400911 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
VAMP1-203ENST00000400911 SMIM15Q7Z3B0 74 aa8.87□□□□□ -0.99
VAMP1-203ENST00000400911 ISOC2Q96AB3 205 aa8.87□□□□□ -0.99
VAMP1-203ENST00000400911 RNASE7Q9H1E1 156 aaKnown RBP8.87□□□□□ -0.99
VAMP1-203ENST00000400911 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
VAMP1-203ENST00000400911 TSHBP01222 138 aa8.86□□□□□ -0.99
VAMP1-203ENST00000400911 MALP21145 153 aa8.86□□□□□ -0.99
VAMP1-203ENST00000400911 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
VAMP1-203ENST00000400911 NUP35Q8NFH5 326 aa8.86□□□□□ -0.99
VAMP1-203ENST00000400911 RPP21Q9H633 154 aaKnown RBP8.86□□□□□ -0.99
VAMP1-203ENST00000400911 APOMO95445 188 aa8.85□□□□□ -0.99
VAMP1-203ENST00000400911 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
VAMP1-203ENST00000400911 MRAP2Q96G30 205 aa8.85□□□□□ -0.99
VAMP1-203ENST00000400911 TMEM242Q9NWH2 141 aa8.85□□□□□ -0.99
VAMP1-203ENST00000400911 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 C9JQL5 133 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 F8W036 122 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.84□□□□□ -0.99
VAMP1-203ENST00000400911 K7EN84 100 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 COX7A2LO14548 114 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 NAT8Q9UHE5 227 aa8.84□□□□□ -0.99
VAMP1-203ENST00000400911 TMEM218A2RU14 115 aa8.83□□□□□ -1
VAMP1-203ENST00000400911 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
VAMP1-203ENST00000400911 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
VAMP1-203ENST00000400911 OCC1Q8TAD7 63 aa8.83□□□□□ -1
VAMP1-203ENST00000400911 DIRC1Q969H9 104 aa8.83□□□□□ -1
VAMP1-203ENST00000400911 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
VAMP1-203ENST00000400911 ST20Q9HBF5 79 aa8.83□□□□□ -1
VAMP1-203ENST00000400911 IGLV7-43P04211 117 aa8.82□□□□□ -1
VAMP1-203ENST00000400911 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
VAMP1-203ENST00000400911 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
VAMP1-203ENST00000400911 ADIRFQ15847 76 aa8.81□□□□□ -1
VAMP1-203ENST00000400911 SEC11CQ9BY50 192 aa8.81□□□□□ -1
VAMP1-203ENST00000400911 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
VAMP1-203ENST00000400911 A0A087WZ39 114 aa8.8□□□□□ -1
VAMP1-203ENST00000400911 C7orf77A4D0Y5 90 aa8.8□□□□□ -1
VAMP1-203ENST00000400911 POLR2KP53803 58 aaKnown RBP8.8□□□□□ -1
VAMP1-203ENST00000400911 PNRC1Q12796 327 aaPredicted RBP8.8□□□□□ -1
VAMP1-203ENST00000400911 RNASE13Q5GAN3 156 aaKnown RBP8.8□□□□□ -1
VAMP1-203ENST00000400911 C5orf38Q86SI9 138 aa8.8□□□□□ -1
VAMP1-203ENST00000400911 C2orf48Q96LS8 159 aa8.8□□□□□ -1
VAMP1-203ENST00000400911 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
VAMP1-203ENST00000400911 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
VAMP1-203ENST00000400911 TRAV13-1A0A0B4J241 112 aa8.79□□□□□ -1
VAMP1-203ENST00000400911 PRR4Q16378 134 aa8.79□□□□□ -1
VAMP1-203ENST00000400911 LINC01551Q86U37 167 aa8.79□□□□□ -1
VAMP1-203ENST00000400911 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
VAMP1-203ENST00000400911 TRBV27A0A0K0K1C4 114 aa8.78□□□□□ -1
VAMP1-203ENST00000400911 H0Y9J4 135 aa8.78□□□□□ -1
VAMP1-203ENST00000400911 RPL23P62829 140 aaKnown RBP8.78□□□□□ -1
VAMP1-203ENST00000400911 FAM168BA1KXE4 195 aa8.77□□□□□ -1.01
VAMP1-203ENST00000400911 GATCO43716 136 aaKnown RBP8.77□□□□□ -1.01
VAMP1-203ENST00000400911 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 A8MWL6 223 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 PPP1R2P9O14990 202 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 APOC3P02656 99 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 RNF151Q2KHN1 245 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 UBE2D4Q9Y2X8 147 aa8.76□□□□□ -1.01
VAMP1-203ENST00000400911 CSDC2Q9Y534 153 aaKnown RBP8.76□□□□□ -1.01
VAMP1-203ENST00000400911 VCYO14598 125 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms