RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CST9LQ9H4G1 147 aa13.42□□□□□ -0.26
PDLIM2-205ENST00000397761 F8VRH5 84 aa13.4□□□□□ -0.26
PDLIM2-205ENST00000397761 Q6ZUT4 128 aa13.4□□□□□ -0.26
PDLIM2-205ENST00000397761 A0A1B0GUV1 79 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 GAGE6Q13070 117 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 ZC2HC1BQ5TFG8 222 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 DGAT2L7PQ6IED9 249 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 PMCHL2Q9BQD1 86 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 VCX2Q9H322 139 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 CDC42SE2Q9NRR3 84 aa13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 MRPL35Q9NZE8 188 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-205ENST00000397761 AMMECR1LQ6DCA0 310 aa13.38□□□□□ -0.27
PDLIM2-205ENST00000397761 OR5A1Q8NGJ0 315 aa13.38□□□□□ -0.27
PDLIM2-205ENST00000397761 CHTOPQ9Y3Y2 248 aaKnown RBP13.38□□□□□ -0.27
PDLIM2-205ENST00000397761 ESRGQ1W209 222 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 TMEM101Q96IK0 257 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 IGLV4-69A0A075B6H9 119 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 DPM2O94777 84 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 PLNP26678 52 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 PKIAP61925 76 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 ATOH7Q8N100 152 aa13.36□□□□□ -0.27
PDLIM2-205ENST00000397761 DNAH7Q8WXX0 4024 aa13.35□□□□□ -0.27
PDLIM2-205ENST00000397761 IGLV4-60A0A075B6I1 120 aa13.35□□□□□ -0.27
PDLIM2-205ENST00000397761 MPV17L2Q567V2 206 aa13.35□□□□□ -0.27
PDLIM2-205ENST00000397761 TRAV9-2A0A087WT02 112 aa13.34□□□□□ -0.27
PDLIM2-205ENST00000397761 IGKCP01834 107 aa13.34□□□□□ -0.27
PDLIM2-205ENST00000397761 RBX1P62877 108 aa13.34□□□□□ -0.27
PDLIM2-205ENST00000397761 RNASE13Q5GAN3 156 aaKnown RBP13.34□□□□□ -0.27
PDLIM2-205ENST00000397761 NFE4Q86UQ8 179 aa13.34□□□□□ -0.27
PDLIM2-205ENST00000397761 TRAV8-6A0A0B4J262 113 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 IGLL5B9A064 214 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 IGLC3P0DOY3 106 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 S100A12P80511 92 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 FAM19A3Q7Z5A8 133 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 C2orf88Q9BSF0 95 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 VAMP8Q9BV40 100 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 CSMD3Q7Z407 3707 aa13.33□□□□□ -0.28
PDLIM2-205ENST00000397761 UBE2D1P51668 147 aa13.32□□□□□ -0.28
PDLIM2-205ENST00000397761 DYNC2H1Q8NCM8 4307 aaKnown RBP13.32□□□□□ -0.28
PDLIM2-205ENST00000397761 C11orf86A6NJI1 115 aa13.3□□□□□ -0.28
PDLIM2-205ENST00000397761 TMEM262E9PQX1 116 aa13.3□□□□□ -0.28
PDLIM2-205ENST00000397761 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
PDLIM2-205ENST00000397761 A0A0J9YXV3 536 aa13.29□□□□□ -0.28
PDLIM2-205ENST00000397761 NUPR2A6NF83 97 aa13.29□□□□□ -0.28
PDLIM2-205ENST00000397761 TINCRA0A1B0GVN0 87 aa13.29□□□□□ -0.28
PDLIM2-205ENST00000397761 hDV102S1A0JD36 115 aa13.29□□□□□ -0.28
PDLIM2-205ENST00000397761 APLNQ9ULZ1 77 aa13.29□□□□□ -0.28
PDLIM2-205ENST00000397761 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
PDLIM2-205ENST00000397761 Q8N3U1 123 aa13.28□□□□□ -0.28
PDLIM2-205ENST00000397761 CHAC1Q9BUX1 264 aa13.28□□□□□ -0.28
PDLIM2-205ENST00000397761 MRPS16Q9Y3D3 137 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-205ENST00000397761 PAM16Q9Y3D7 125 aa13.28□□□□□ -0.28
PDLIM2-205ENST00000397761 LINC00588Q9Y4M8 146 aa13.27□□□□□ -0.29
PDLIM2-205ENST00000397761 TENM2Q9NT68 2774 aa13.27□□□□□ -0.29
PDLIM2-205ENST00000397761 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
PDLIM2-205ENST00000397761 HSBP1L1C9JCN9 74 aa13.26□□□□□ -0.29
PDLIM2-205ENST00000397761 TCTAP57738 103 aa13.26□□□□□ -0.29
PDLIM2-205ENST00000397761 SPATA45Q537H7 98 aa13.26□□□□□ -0.29
PDLIM2-205ENST00000397761 LINC00242Q5T6M2 205 aa13.26□□□□□ -0.29
PDLIM2-205ENST00000397761 STPG4Q8N801 248 aa13.26□□□□□ -0.29
PDLIM2-205ENST00000397761 CCL18P55774 89 aa13.25□□□□□ -0.29
PDLIM2-205ENST00000397761 SEC11AP67812 179 aa13.25□□□□□ -0.29
PDLIM2-205ENST00000397761 UPK3BQ9BT76 320 aa13.25□□□□□ -0.29
PDLIM2-205ENST00000397761 KLK5Q9Y337 293 aaPredicted RBP13.25□□□□□ -0.29
PDLIM2-205ENST00000397761 ZNF22P17026 224 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-205ENST00000397761 ANKRD39Q53RE8 183 aa13.24□□□□□ -0.29
PDLIM2-205ENST00000397761 TRAV13-1A0A0B4J241 112 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 LINC01556Q5JQF7 62 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 LINC00959A0A1B0GUT2 108 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 CCL25O15444 150 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 ANGP03950 147 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 DNAH10OSP0CZ25 163 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 HERVK_113P63121 156 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 LINC00269Q8N2A0 174 aa13.23□□□□□ -0.29
PDLIM2-205ENST00000397761 COX6A2Q02221 97 aa13.21□□□□□ -0.3
PDLIM2-205ENST00000397761 REG3AQ06141 175 aa13.21□□□□□ -0.3
PDLIM2-205ENST00000397761 TMEM170BQ5T4T1 132 aa13.21□□□□□ -0.3
PDLIM2-205ENST00000397761 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.3
PDLIM2-205ENST00000397761 TMEM223A0PJW6 202 aa13.2□□□□□ -0.3
PDLIM2-205ENST00000397761 IGHV3-30P01768 117 aa13.19□□□□□ -0.3
PDLIM2-205ENST00000397761 IGHV3-33P01772 117 aa13.19□□□□□ -0.3
PDLIM2-205ENST00000397761 IGHV3-30-3P0DP02 117 aa13.19□□□□□ -0.3
PDLIM2-205ENST00000397761 IGHV3-30-5P0DP03 117 aa13.19□□□□□ -0.3
PDLIM2-205ENST00000397761 CDKN2A-AS1Q9UH64 79 aa13.19□□□□□ -0.3
PDLIM2-205ENST00000397761 KLK12Q9UKR0 248 aa13.19□□□□□ -0.3
PDLIM2-205ENST00000397761 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
PDLIM2-205ENST00000397761 E9PLD3 99 aa13.18□□□□□ -0.3
PDLIM2-205ENST00000397761 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
PDLIM2-205ENST00000397761 IGHV3OR16-9A0A0B4J2B5 98 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 SIVA1O15304 175 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 SS18Q15532 418 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 ENHOQ6UWT2 76 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 WWC2-AS2Q96NR7 200 aa13.17□□□□□ -0.3
PDLIM2-205ENST00000397761 TSTD3H0UI37 97 aa13.16□□□□□ -0.3
PDLIM2-205ENST00000397761 HERVK_113P61574 105 aa13.16□□□□□ -0.3
PDLIM2-205ENST00000397761 CLPSL2Q6UWE3 100 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms