RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SPINK13Q1W4C9 94 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 OCIAD2Q56VL3 154 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 PPDPFLQ8WWR9 84 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 TOMM7Q9P0U1 55 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 IGHV3OR16-8A0A075B7F1 116 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 IGHV3-66A0A0C4DH42 116 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 J3KT08 172 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 SLC25A29Q8N8R3 303 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 TRAV12-3A0A0B4J271 114 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 SNRPCP09234 159 aaKnown RBP4.26□□□□□ -1.73
PTPRD-206ENST00000397617 SHISA2Q6UWI4 295 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 PKD1L1Q8TDX9 2849 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 UBE2D1P51668 147 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 HERV-K104P63124 156 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 BVES-AS1Q5T3Y7 98 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 TINCRA0A1B0GVN0 87 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 C5orf47Q569G3 176 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 CXCL5P42830 114 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 UBE2D3P61077 147 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 UBE2D2P62837 147 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 C2orf91Q6ZV80 131 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 CFAP126Q5VTH2 177 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 CSNK1G2-AS1Q8NCQ2 148 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 SAMD5Q5TGI4 173 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 C3orf56Q8N813 242 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 SLURP1P55000 103 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 SS18Q15532 418 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 NRGNQ92686 78 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 IGLV5-39A0A0G2JS06 123 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 MYMXA0A1B0GTQ4 84 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE12BA1L429 117 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
PTPRD-206ENST00000397617 TSHBP01222 138 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 PRO0255Q9UI72 69 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 IGKV3OR2-268A0A0C4DH90 116 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 LEPROTO15243 131 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 C1orf158Q8N1D5 194 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 BAALCQ8WXS3 180 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 CD28P10747 220 aa4.24□□□□□ -1.73
PTPRD-206ENST00000397617 F6UB75 175 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GNRH2O43555 120 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 TRACP01848 142 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 RBMY1FQ15415 496 aaKnown RBP4.23□□□□□ -1.73
PTPRD-206ENST00000397617 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 C9orf118A6NHY6 69 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 J3QQQ9 107 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 ATOX1O00244 68 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 NDUFC1O43677 76 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 MPV17L2Q567V2 206 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 C6orf226Q5I0X4 101 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 IGLV4-3A0A075B6K6 122 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 MUC21Q5SSG8 566 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 V9GYY9 64 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE12JA6NER3 117 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE7O76087 117 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE12FP0CL80 117 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE12GP0CL81 117 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE12IP0CL82 117 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 HTN3P15516 51 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE4Q13068 117 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 ERG28Q9UKR5 140 aa4.23□□□□□ -1.73
PTPRD-206ENST00000397617 IGHV1-58A0A0C4DH39 117 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 P0DMU3 169 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 FAM231AP0DMU4 169 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 FAM231CP0DMU5 169 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 STPG4Q8N801 248 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 CDPF1Q6NVV7 123 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 IMUPQ9GZP8 106 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 K7EQD1 137 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 PAX4O43316 350 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 ZNF561-AS1K7EIQ3 104 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 TMEM243Q9BU79 118 aa4.22□□□□□ -1.73
PTPRD-206ENST00000397617 LINC00158P58513 81 aa4.21□□□□□ -1.73
PTPRD-206ENST00000397617 GIG44P09565 113 aaPredicted RBP4.21□□□□□ -1.73
PTPRD-206ENST00000397617 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-206ENST00000397617 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 A0A0J9YY99 117 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 EGFEM1PQ0D2K5 195 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 LAMA5O15230 3695 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 A0A1B0GX51 115 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 K7EP34 96 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 Q71RC1 249 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-206ENST00000397617 VSIG2Q96IQ7 327 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 ZNF479Q96JC4 524 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 SPINK8P0C7L1 97 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 SBSPONQ8IVN8 264 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 NKAPP1Q8N9T2 125 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 C10orf99Q6UWK7 81 aa4.21□□□□□ -1.74
PTPRD-206ENST00000397617 PRR31Q5SQ13 230 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 LOC100131303A0A0U1RQF7 123 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 H3BMG7 143 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 LY6G6DO95868 133 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms